| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0852 |
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| Symbol | |
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| ID | 5105212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 786784 |
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| End bp | 787926 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506757 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190950 |
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| Protein GI | 146303634 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.498161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGAT TTCAGGGCAT GGACAGGAGA TTTTTCCTGA CCACTGGCCT AGTGGCAATG
CTATTCAATT CCGTGTATCA GTACTCATGG AACGCCTTCT TTCCGTTGCT CGTGAAGGGT
TTCCATGCAT CTGCAAGCTC CGTAGAGGTC GGCTTTGCGC TGTTCGTGAT TTCCTCGACG
TCATTTCAAG TGTTGAGTGG AAGGATTTCA GACCTCAGGG GACCTAGAGT GATGGGTTCC
CTTGGTGTTC TTGCCTTCTC CTTCGGCCTA ATCCTGAGTT CGTTGATACC AAGTCTCCCC
CTCTTTTACG CCACCTGGAC CCTAGGTAGT ATCGGTGAAG GAGTTCTTTA CGGGATTTCC
CTGAACCTAG CCATCAAGTG GTACGCGGAA AGAAGGGGGT TGGCCTCAGG TCTAGTTTCC
ATGGGCTTCG GCTTAGGGGG AGCCCTCGTC AATCCCCTTA TTGAGCTCTC CAACAATTTC
AGAAGTTCCA TGTTAGCAAT TGGCGTCGCC TCTTTGATCC TTCTCCCGCT CTTTCTTCTC
TCAAGATACC CAAGTGACGT GAGGGGTTCA TCTCCAGGGG AAACTTTGAG GGAGACCAGG
TTTTGGCTCA TCTACGTATC CTTCGTTCTA GCCTCTCTTC CCTTACTTGT TGCGTCTTCC
TCTCTAGGAG AACTAGGTCA GTACCTCAAC AGCGTGGAAT ACACGATTGC CACCATATAC
TTTCCAATAG CCAGCGGAGT GGGAAGGCCT ATCATGGGGT ACCTCACCGA CCGTCTCGGG
AGATTAAGGG GAATAGACTA CATGACCGCG GGTATCCTGC TAGGAACATC CCTCGTGGTG
ATTGGGTTCC TGGGAAGAAA CCTGCTCCTA CTGGCGGGGA TAGCCCTGGT GGGAATAATG
GGAGGAACTA CTTACCCCCT TTACTCAGCG CTGGTGGGAG ACTTGTACGG GCCTAGATAC
TCCACCGCAA ACACTTCCCT CCTCTACACT GGTAAGATAG TCTCAGGGGT TCTAGGAAGC
CTCATCTTTT CCTCGCTGTT TCAGTACAGT AATGTCCTTG GATTGGGTTT TATCATGGGG
GCGACAGCCC TGTCTACGGT TTCGCTCGCT CTACTTCATA GAATCACAAG AGGAGCAAGC
TAA
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| Protein sequence | MSRFQGMDRR FFLTTGLVAM LFNSVYQYSW NAFFPLLVKG FHASASSVEV GFALFVISST
SFQVLSGRIS DLRGPRVMGS LGVLAFSFGL ILSSLIPSLP LFYATWTLGS IGEGVLYGIS
LNLAIKWYAE RRGLASGLVS MGFGLGGALV NPLIELSNNF RSSMLAIGVA SLILLPLFLL
SRYPSDVRGS SPGETLRETR FWLIYVSFVL ASLPLLVASS SLGELGQYLN SVEYTIATIY
FPIASGVGRP IMGYLTDRLG RLRGIDYMTA GILLGTSLVV IGFLGRNLLL LAGIALVGIM
GGTTYPLYSA LVGDLYGPRY STANTSLLYT GKIVSGVLGS LIFSSLFQYS NVLGLGFIMG
ATALSTVSLA LLHRITRGAS
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