| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0688 |
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| Symbol | |
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| ID | 5105294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 628763 |
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| End bp | 629230 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506592 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001190787 |
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| Protein GI | 146303471 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000313702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000226618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACAGATT ATTATTACCT AGATAACGTG GACAGGAAAA TTCTAAACAT ATTGCAGAGG
GATTCGAGGA CTCCCTTCTC TAGACTGGCA AAGATGCTTG ACTTAAGCGA GTCCACAATA
CATATGCGTG TAAAGAGACT TGTAAAGGAA GGCGTCATCA AGAACTTTGG AATAGAGATC
GACCTGGATA GGATAGGCCT AAACGTCTTG GCCTTCGTCC TCATTAAGGC AGAGCCTAAA
AAGTACGAGG AAATACTCAA GAAGCTAGTG GAGATGAATG AGATCTACGA TATATACGAC
GTGACTGGGG AGTACTATGC CCTGCTGAAG GTCAGGGTTA GGTCCAGGGA AGAGCTGGCC
AAGGTTTTGG ACTATATAGG CAAGCTTGAG GGCGTTACCT CAACCTACAC AATGGTGGCC
CTGAGAACCA TAAAGGAGAA AAAGTACCTA GACGAGGAAG ATCAATAA
|
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| Protein sequence | MTDYYYLDNV DRKILNILQR DSRTPFSRLA KMLDLSESTI HMRVKRLVKE GVIKNFGIEI
DLDRIGLNVL AFVLIKAEPK KYEEILKKLV EMNEIYDIYD VTGEYYALLK VRVRSREELA
KVLDYIGKLE GVTSTYTMVA LRTIKEKKYL DEEDQ
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