Gene Msed_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0595 
Symbol 
ID5105567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp548951 
End bp549421 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content49% 
IMG OID640506499 
ProductNUDIX hydrolase 
Protein accessionYP_001190694 
Protein GI146303378 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.652543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGCG ATGCGGCAGT AGTCTTGATT TTCAGGGATG ATGGGAGATT CCTCTTAATT 
AAGAGGGCTG ATCAGAAGGG AGATCCTTGG AGCGGACACA TGGCGCTTCC AGGCGGGCAC
AGGGAGGTAA ACGAAAGCTG TGAGACTACC GCTGTGAGGG AGGCGCAGGA GGAGGTAGGA
ATTACGCCCA CAAACTTGAG CTATCTTGGA ATGTACTCTC CACACAACAG GGAAATGCGC
GTTGCTGTGT TCGTTGGACA TACAACCTCT CCCCAGGTAA AGATAGATGG GGAGGTGGAC
AAGTGGTTTT GGGTTCATCC CAGCGAATTA AAGGAGGAAA AGGATCATTT TGTTTACCAG
AGCTATATCA TTTGGGGAAT GACCTACAGA ATACTAAAGG ACTTCCTTTC AGCCCGGCAA
CGATCAAGTC ATCAAGTCCA AGCCGTCGAC CAGTCATCAC TTAAGGAATA G
 
Protein sequence
MECDAAVVLI FRDDGRFLLI KRADQKGDPW SGHMALPGGH REVNESCETT AVREAQEEVG 
ITPTNLSYLG MYSPHNREMR VAVFVGHTTS PQVKIDGEVD KWFWVHPSEL KEEKDHFVYQ
SYIIWGMTYR ILKDFLSARQ RSSHQVQAVD QSSLKE