| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0031 |
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| Symbol | |
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| ID | 5105170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 27200 |
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| End bp | 28486 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640505925 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001190132 |
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| Protein GI | 146302816 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.399579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.119769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTAA CTGATTTCGA GAGTATGGCT TTGGACGTTG CAGTGAGATA CAAAGGGAAA
ATCCAGGTAA TGCCTAAGGT TCCTGTGAAC TCCCTGAACG ATTTCTCTAT ACTTTATACT
CCCGGGGTGG CGGCCGTTTC TCAGGCTATA CACAAGAATA GAGAGCTATC ATTTCATTAT
ACATATAGGT GGAATGCTAT CGCAGTGGTC ACAGATGGAT CCAGGGTACT GGGTTTAGGG
GATATTGGTC CTGAGGCTGC CATGCCAGTC ATGGAAGGTA AAGCACTCAT CTTCAAGTTT
CTAGGTGGGG TAGATGCTAT ACCCCTTCCC TTAGGGACAA AGGACGCAGA CAAGATAGTG
GAGACAGTTA AGTTATTGGA ACCTGCATTC GGAGGAATCA ACCTTGAGGA CATAGAATCC
CCTAAGTGCT TCTACGTTCT TGAGAGACTC AAGAGCATTA TGGAGATCCC TGTTTGGCAT
GACGATCAGC AAGGTACTGC AGGCGCTACC TTGGCGGGAT TGATTACAGC CCTTGAAATA
ACTGGGAAGA ACCCTAAGAA CATCAAGATT GTTCTCTTTG GTACAGGTGC AGCTAACATA
GCTACCGCGC GATTGCTTGG AAAATTTGGA ATTCCTCTAA AAAACATAGT TCTTGTAGAT
TCCGCAGGAG TCATATACAG GGGGAGACAG GACGAGGAAA GAATGAAAAC AGAAAATCCC
TGGAAGTACG AGTTACTTAG GGAAACCAAT GGAGAAAATG TGACCACTAT AGAGGATGCC
TTCAAGGGAG CTGACGTTGT GATAGCGGCC TCAAAGCAGG GACCAGATGT GATTAAGAAG
AGTTGGATAA AGCTCATGAA TACTGACCCC ATAGTATTTG CTCTAGCTAA TCCAACACCT
GAAATATGGC CAGAGGAGGC AAAGGAAGCC GGAGCTAAAA TTGTGGCGAC TGGAAGAAGT
GATTTCCCGA ACCAAGTCAA TAACTCCCTC ATTTTCCCAG GTGTTTTCAG GGGTTCCCTA
GATGTTAGGG CCAAGGCGAT AACGGACGAG ATGGTGATTG ATGCAGCAAG GGAGCTGGCC
AGTCACGTAA GGGAGAAAGG AGCAACGCCT GACTATATAA TTCCCAAGAT GACGGAGTGG
GAAATATATC CTCGTGTAGC GGCAGCCGTG GGTGTAAGGG CCATACAGCA GAACGTCGCT
AGAGTGTCTA GAAATTATAA TGAACTATTT GACAACGCTA AGACCTTGAT CGAGAAGGCA
AGAACCCAGT TAAGATCTAT AGCTTAA
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| Protein sequence | MVVTDFESMA LDVAVRYKGK IQVMPKVPVN SLNDFSILYT PGVAAVSQAI HKNRELSFHY
TYRWNAIAVV TDGSRVLGLG DIGPEAAMPV MEGKALIFKF LGGVDAIPLP LGTKDADKIV
ETVKLLEPAF GGINLEDIES PKCFYVLERL KSIMEIPVWH DDQQGTAGAT LAGLITALEI
TGKNPKNIKI VLFGTGAANI ATARLLGKFG IPLKNIVLVD SAGVIYRGRQ DEERMKTENP
WKYELLRETN GENVTTIEDA FKGADVVIAA SKQGPDVIKK SWIKLMNTDP IVFALANPTP
EIWPEEAKEA GAKIVATGRS DFPNQVNNSL IFPGVFRGSL DVRAKAITDE MVIDAARELA
SHVREKGATP DYIIPKMTEW EIYPRVAAAV GVRAIQQNVA RVSRNYNELF DNAKTLIEKA
RTQLRSIA
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