Gene Pmen_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4245 
Symbol 
ID5106669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4649001 
End bp4649414 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content61% 
IMG OID640505509 
Productrhodanese domain-containing protein 
Protein accessionYP_001189724 
Protein GI146309259 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0856379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCA ACCTGATTGA ATTCATCATT AACCACTATG TACTGAGCGG ATTGTTCGTC 
GTGCTGCTGG TGGCGCTGAT CGTCACCGAA ATGCGCAAGG GCGGTCAGAG CCTGTCCAGC
CGCGAGCTGA CCGCGCTGGT CAACAGCGAG CAGGGCGTGG TGTTGGATAT CCGTGCGCAG
AAGGAGTTCT CCGCCGGGCA CATCGTCGAT TCCCTGCACA TTCCCTATGA CAAGGTGGCA
GCGCGCATCG CCGAGCTGGA AAAGCACAAG GCCAAGACCA TCGTCGTCGT CGACGCCATG
GGTCAGCATG CCGGCAGCAT CGCCCGCGAG CTGAAGAAGG CCGGCTACAC CGCTGCCAAG
CTGTCCGGTG GCATCGCCAC CTGGCGTGGC GACAACCTGC CGCTGGTGAA GTGA
 
Protein sequence
MFANLIEFII NHYVLSGLFV VLLVALIVTE MRKGGQSLSS RELTALVNSE QGVVLDIRAQ 
KEFSAGHIVD SLHIPYDKVA ARIAELEKHK AKTIVVVDAM GQHAGSIARE LKKAGYTAAK
LSGGIATWRG DNLPLVK