Gene Pmen_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4187 
Symbol 
ID5106611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4590011 
End bp4591441 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content67% 
IMG OID640505451 
Productaldehyde dehydrogenase 
Protein accessionYP_001189666 
Protein GI146309201 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCG ACATCGCCTA CCTGCAGCAG AACCAACAGC AGATCAACCA GCTGGACGCC 
ACCTTCGCCC TGCAGCGCGC GGCCTTTGCC GCCAACCCGA TGCCCTCGGC CGAGCAGCGC
ATTCAGTGGC TGAAATCCCT CAGCGAGCTG CTGACCGAGC AGCAGGATGC ACTGATCGCG
GCGATCTCCC GGGACTTCAG CAATCGCTCA GCCGACGAGA CCCTGCTCGC CGAGCTGATG
CCCAGCCTGC ATGGCATCCA TTACGCGTCC AGGCGCATCA AGAAGTGGAT GAAGCCCTCG
CGGCGCAGCG TCGGCCTGCA GTTCATGCCC GCCGCGGCCA AGGTCGTCTA CCAGCCGCTG
GGCGTGGTCG GCATCATCGT GCCGTGGAAC TACCCGCTGT TTCTCGCCAT CGGCCCGCTG
ACCGGCGCGC TGGCCGCCGG CAACCGGGTG ATGATCAAGA TGAGCGAGTC CACCCCAGCC
ACCTCGCAGC TGGTCAAGGA CCTGCTGGCG CGCGTCTTCC CCGAGGATCT GGTCAGCGTC
GCTCTGGGCG AGGCGGAAGT CGGCATGGCC TTCTCCAAGC TGCCGTTCGA CCACCTGCTG
TTCACCGGCG CCACCAGCAT CGGCCGGCAC GTGATGCGCG CCGCCGCCGA GAACCTGACT
CCGGTGACCC TGGAGTTGGG CGGCAAGTCG CCGGCTATCG TTTCCGCCGA CGTGCCGCTG
GAGCACGCCG CCGAGCGCAT CGCCTTCGGC AAGACCCTCA ACGCCGGGCA GACCTGCGTG
GCGCCTGACT ATGTACTGGT GCCGCGCGAT CGCGTCGACG GTTTCGTCAG CGCCTACCGC
GACGTCGTGC AGCGCTTCTA CCCGCAGCTC AAGGACAACC CCGACTACAC CGCGATCATC
AACGAGCGCC AGCTGGCCCG CCTCAACGGC TACCTGCAGG ACGCCCAGGC CAAGGGCGCG
CGCATCGTCC CGATCTACCC AGAGGCCCAG GGCCGGCGCC TGCCGCAGAG CCTGGTGCTG
GACGTCAACG ACGACATGAA GTTGATGCAG GACGAGATCT TCGGCCCGCT GCTGCCGGTG
GTGCCCTATG AGCGCCTGGA CGACGCCTTC GCCTACGTCA ACGCGCGCCC CCGGCCGCTG
GCGCTGTACT ACTTCGGCTA CGACAAGCGC GAGCAGCAGC GCGTGCTGCA CGAGACCCAT
TCCGGCGGCG TGTGCCTGAA CGACACCCTG CTGCACGTGG CCCAGGACGA CATGCCGTTC
GGCGGCATCG GCCCCTCCGG CATGGGCCAT TACCACGGTC ACGAAGGTTT CCTGACCTTC
AGCAAGGCCA AGGGCGTGTT CATCAAGCAG CGCTTCAACG CCGCGCGGCT GATCTACCCG
CCCTATGGCA AGGCGATCCA GAAGCTGGTT TACAAGCTGT TCGTACGCTG A
 
Protein sequence
MVADIAYLQQ NQQQINQLDA TFALQRAAFA ANPMPSAEQR IQWLKSLSEL LTEQQDALIA 
AISRDFSNRS ADETLLAELM PSLHGIHYAS RRIKKWMKPS RRSVGLQFMP AAAKVVYQPL
GVVGIIVPWN YPLFLAIGPL TGALAAGNRV MIKMSESTPA TSQLVKDLLA RVFPEDLVSV
ALGEAEVGMA FSKLPFDHLL FTGATSIGRH VMRAAAENLT PVTLELGGKS PAIVSADVPL
EHAAERIAFG KTLNAGQTCV APDYVLVPRD RVDGFVSAYR DVVQRFYPQL KDNPDYTAII
NERQLARLNG YLQDAQAKGA RIVPIYPEAQ GRRLPQSLVL DVNDDMKLMQ DEIFGPLLPV
VPYERLDDAF AYVNARPRPL ALYYFGYDKR EQQRVLHETH SGGVCLNDTL LHVAQDDMPF
GGIGPSGMGH YHGHEGFLTF SKAKGVFIKQ RFNAARLIYP PYGKAIQKLV YKLFVR