| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3877 |
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| Symbol | |
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| ID | 5106411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4262887 |
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| End bp | 4264281 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505131 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001189356 |
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| Protein GI | 146308891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATC TGCACAGCGA GCGCATGAGC AGTGGCGAGA CCCGCGCGGC CGGCGGCCTG
GCGCTGGTGT TTGCATTTCG TATGCTGGGC ATGTTCATGG TGCTGCCGGT ACTGGCCACC
TACGGCATGG ACCTGACCGG CAGCACGCCG GCACTGATCG GCCTGGCCAT CGGTGCCTAT
GGTTTGACCC AGGCTGTGCT GCAAATTCCC TTCGGCATGC TCAGCGACCG CATCGGCCGA
CGTCCGGTGA TCTATGTCGG CCTGCTGATC TTCGCTGCCG GCAGCGTGCT GGCGGCCAAT
GCCGACTCGA TCTGGGGCGT GATCGCCGGG CGCGTGCTGC AGGGCGCCGG GGCGATCTCG
GCGGCGGTGA TGGCGCTGCT CTCGGACCTG ACCCGCGAAC AGCACCGCAC CAAGGCCATG
GCCATGATCG GCATGAGCAT CGGCCTGTCG TTCGCCGTGG CCATGGTGGT CGGGCCGCTG
CTGACGCGCG CCTTCGGTCT GGCCGGGCTG TTCTGGGCCA CCGCGGCGAT GGCGCTGCTG
GGCATCCTGA TCGTCGTCGG GGTCGTGCCG AAAGAGGCCG GGCCGCTGCA GCACCGCGAG
TCCGGGGTAG CGGCGCAGGC GCTGTGGCCG ACCCTCAAGC ATGGCGACCT GCTGCGTCTG
GACTTCGCCA TTCTGGCCCT GCACGCGGTG CTCATGGCCA GCTTCGTCGC CTTGCCGCTG
GCGCTGGTGG AGCAGGGTGG GCTGGTCAAG GAGGAACACT GGTGGGTCTA CCTCACCGCG
CTGCTGATCG GCTTCTTCGG CATGGTGCCG TTCATCATCT ACGGCGAGAA GAAGCGCCAG
ATGAAGCGCG TGCTGCTCGG CGCGGTAAGC GTATTGCTGC TCTGCGAGCT GTACTTCGCC
CTGTTCGGCA CCAGCCTGCG CGCGCTGGTG CTGGGGATCG TGCTGTTCTT CACCGCCTTC
AACCTGCTGG AGGCTTCGCT GCCATCACTG GTCAGCAAGG TGGCGCCGGC CGGCGGCAAG
GGCACGGCGA TGGGCGTCTA CTCCACCAGC CAGTTCCTCG GCGCGGCGCT GGGTGGCATT
CTCGGCGGCT GGCTGTATCA GCAGGCGGGG CTCGTCGGTG TGTTCATCGG CTGCGCTGCG
CTCTGTGCAA TTTGGCTGGC CATTGCTGTT ACTATGCGCG AACCGCCGTA TGTGACCAGT
TTGCGCCTGC CGCTCGACGC CGCGGCATTG GCCGATGTCG GACTGGTCGA GCGCCTCAAG
GCGACGCCGG GAGTGGCGGA TGCCGTGGTG GTGGTCGACG AAGCGGCCAT CTATATCAAA
GTGGATACCC AACAAGTGGA TCGCACGTCT CTGCAGCGCC TGATCGCATC GGCGCCAGCG
GCGAGCGGAG CCTAG
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| Protein sequence | MHDLHSERMS SGETRAAGGL ALVFAFRMLG MFMVLPVLAT YGMDLTGSTP ALIGLAIGAY
GLTQAVLQIP FGMLSDRIGR RPVIYVGLLI FAAGSVLAAN ADSIWGVIAG RVLQGAGAIS
AAVMALLSDL TREQHRTKAM AMIGMSIGLS FAVAMVVGPL LTRAFGLAGL FWATAAMALL
GILIVVGVVP KEAGPLQHRE SGVAAQALWP TLKHGDLLRL DFAILALHAV LMASFVALPL
ALVEQGGLVK EEHWWVYLTA LLIGFFGMVP FIIYGEKKRQ MKRVLLGAVS VLLLCELYFA
LFGTSLRALV LGIVLFFTAF NLLEASLPSL VSKVAPAGGK GTAMGVYSTS QFLGAALGGI
LGGWLYQQAG LVGVFIGCAA LCAIWLAIAV TMREPPYVTS LRLPLDAAAL ADVGLVERLK
ATPGVADAVV VVDEAAIYIK VDTQQVDRTS LQRLIASAPA ASGA
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