| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3564 |
|---|
| Symbol | |
|---|
| ID | 5106111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3930588 |
|---|
| End bp | 3931751 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640504817 |
|---|
| Product | peptidase M19, renal dipeptidase |
|---|
| Protein accession | YP_001189044 |
|---|
| Protein GI | 146308579 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.388396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAC TGCTGATCGC CCTGCTTCTG CTGGTACCCC TCTCCGCCCT GGCCGTGCTG
GGCCTGCCTC AGGTCATCGA CGCACAGATG AACAGCGTCG CCAGCCCGCC GCCCTATCCG
GCCAGCGCCA GCGCGCAGAA GCTGCACCAG GGCCTGTTCG TCGCCGATCT GCACGACGAC
GCCCTGCTCT GGGAGCGCGA TCTGCTCAAA CGCTACGATT ACGGTCATTC CGACCTGCCG
CGCATGCTCG AAGGCCGTCT CGGCCTGCAG GTGTTCTCCA CCGTGACCAA GACCCCGCGC
GCCCTGAACA TGGAGAGCAA TGAGGCGGAC AGCGACAACA TCACCCTGCT GGCCATGGCC
CAGCGCTGGC CGCGGGAAAG CTGGAACAGC CTGCTGCAGC GCGCGCTGTA CCAGGCGCAG
AAACTTCAGG ACGCCGCGGC CGGCAGTGAC GGGCGCCTGG TGCTGATCCG CAGCCGCGAC
GATCTTGCCC GCTTCATCGA GGCCTGGGAG AAGGACCCGC GTCGCGTGGC CGGCCTGCTC
GCCACCGAGG GCCTGCAACC CATCGAGAAC AGGCTGGAAA ACGTCGATGC GCTGTATGAC
GCCGGTTTTC GTATCGCCGG GCTGACCCAC TTCTTCGACA ACGAGGTCGG CGGCTCGGCC
CACGGCCTGA AGAAAGACGG CCTGACCCCG CTGGGGCGAC AGGTCATCGC GCGTCTGGAA
GAAAAATCCA TGCTGGTCGA CCTGGCCCAC GCCTCGCGCC CGCTGATCGA CGACGTTTTG
GCCATGGCCA CGCGCCCGGT GCTGGTCTCG CACACCGGGG TCGAGGGCAC CTGCCCCGGC
ACGCGCAACC TCAGCGACAA GCACCTGCAG GCCATCGCCG CCACGGGTGG AGTGATCGGC
ATCGGCTACT GGAGCACCGC GGTGTGCGAC ACCTCGGTCG CGGCCATAGT CCGCGCCATC
CGTTACACGG CGGACAAGGT CGGTGTCGAG CACGTCGCCT TGGGGTCGGA TTTCAACGGC
ACCGTACACA CGCCGTTCGA TGTCACCGGC CTGGCGCAGC TCACCGAAGG CCTGCAGGGC
GCCGGCTTCT CCGCCGAGGA GATCGCCGCG ATCATGGGCG GTAACGTCCA GCGCCTGCTG
CTGGCCAGTC TGCCGGAGAA TTGA
|
|---|
| Protein sequence | MRKLLIALLL LVPLSALAVL GLPQVIDAQM NSVASPPPYP ASASAQKLHQ GLFVADLHDD
ALLWERDLLK RYDYGHSDLP RMLEGRLGLQ VFSTVTKTPR ALNMESNEAD SDNITLLAMA
QRWPRESWNS LLQRALYQAQ KLQDAAAGSD GRLVLIRSRD DLARFIEAWE KDPRRVAGLL
ATEGLQPIEN RLENVDALYD AGFRIAGLTH FFDNEVGGSA HGLKKDGLTP LGRQVIARLE
EKSMLVDLAH ASRPLIDDVL AMATRPVLVS HTGVEGTCPG TRNLSDKHLQ AIAATGGVIG
IGYWSTAVCD TSVAAIVRAI RYTADKVGVE HVALGSDFNG TVHTPFDVTG LAQLTEGLQG
AGFSAEEIAA IMGGNVQRLL LASLPEN
|
|---|
| |