| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3351 |
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| Symbol | |
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| ID | 5105823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3701158 |
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| End bp | 3702261 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504607 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001188835 |
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| Protein GI | 146308370 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCC ATGTGCTCCC CCTAGTTGCG TCTCTGGGTC TTGTCTTTCT CCTGTCTGCC
TGCGGTAACG GCGAGCCGAT GCAGCAGCCG ATCCGACCTG CCATGGTGGT GCAGCCGCAA
CCGGCTGCGG CCCTGGTCGA CAGTTATCCG GGCGAGGTTC GCGCACGTTA CGAGCCGGAG
CTGGCGTTCC GCATTACCGG CAAGGTGAGC AAGCGCATGG TGGATGTCGG CGATCGAGTG
AAGAAGGACC AGGCGCTGGC GGAGTTGGAC CCGCAGGATG TACGCCTGCA ACTGGAGGCG
ACTCGTGCGC AGGTGGCGGC CGCAGAGGCC AATCTGCAGA CCGTGCGTGC CGAGCGCGAC
CGTTACAAGA CCTTGCTCGA GCGCAACCTG GTCAGCCGCT CGCAGTATGA CAATGCCGAG
AACCTCTACC GTTCCGGCGA AGCGCGCCTG AAGCAGATCA GGGCCGAGTA CGACGTGGCC
AGCAATCAGG CCGGTTACGC CGTGCTGCGC GCTTCCCAGG ACGGCGTGAT TGCGCGTCGC
GCCGTTGAGG TGGGGCAGGT GGTGGCCGCC GGGCAGACCG TCTTCACCCT GGCCGCCGAT
GGCGAGCGCG AGGTCTCCAT CAGCCTGCCG GAGCAAAGCT TCGGTCGCTT CGCAATCGGT
CAGCCGGTGG AGGTGGAACT CTGGTCGCAG CCTGATCAGC GCTTCCCCGG TCGCATCCGC
GAAATGGCGC CGGCGGCCGA TCCGCAGTCG CGTACCTTCG CCGCCCGGGT TGCCTTTAGC
GAAGGCAAGG TGCCGGCCGA ACTGGGGCAA AGCGCGCGCG TATTCATCGC CAGCAACGGC
GAGGTGCCGC TGGCGGTACC GCTGTCGGCG CTCAGCGCCG AACAGGGCCA GCCCTTCGTC
TGGGTGGTCG ATCCCCGGGA GCACACCGTG CAGCGCCGTC TGGTGCGGGT CGGCGCCTAT
GGCGATGATC GCGTGCCGGT GCTCGAAGGC CTGTCGGCAA CCGACTGGGT GGTAGCGGCG
GGTGTCCAGG TGTTGCGCGA GGGTCTGCAG GTACGCCCGG TGGACCGCGA CAACCGCAAC
GTCGAACTGG CCGCCAAGGA GTAA
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| Protein sequence | MSRHVLPLVA SLGLVFLLSA CGNGEPMQQP IRPAMVVQPQ PAAALVDSYP GEVRARYEPE
LAFRITGKVS KRMVDVGDRV KKDQALAELD PQDVRLQLEA TRAQVAAAEA NLQTVRAERD
RYKTLLERNL VSRSQYDNAE NLYRSGEARL KQIRAEYDVA SNQAGYAVLR ASQDGVIARR
AVEVGQVVAA GQTVFTLAAD GEREVSISLP EQSFGRFAIG QPVEVELWSQ PDQRFPGRIR
EMAPAADPQS RTFAARVAFS EGKVPAELGQ SARVFIASNG EVPLAVPLSA LSAEQGQPFV
WVVDPREHTV QRRLVRVGAY GDDRVPVLEG LSATDWVVAA GVQVLREGLQ VRPVDRDNRN
VELAAKE
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