| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3107 |
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| Symbol | |
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| ID | 5107430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3433664 |
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| End bp | 3434443 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504364 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001188593 |
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| Protein GI | 146308128 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.757565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG CCAGTCCGAG CGTCTTTCCC CAGCCGTTTC GTGCGCTGGG ATGCGCCGAG
TGCCGTAACG CCGAGGCACT CGGCTTCGAC TTCACCATGG CGTTCCAGTT GATCGTCGAT
GTCCAGGAAA ACAGGCCGTT TGCCTACGAG GCACTGGTGC GCGGCAGCCA GGGCGAGTCG
GCCGGCGAAG TGCTGGGAAG GGTCAACGAC AGCAATCGCT ACCGTTTCGA CCAGGCCTGC
CGGGTCAAGG CCATCGAGCA GGCGGCAACC CTCGGGCTGC TCGATATTCC GGACTGTCTG
CTCAGCATCA ATTTTTTGCC CAACGCGGTG TATCGCGCCG AAACCTGCAT CCGCGCCACG
CTGGAGGCGG CGCAGCGCTT CGACTTCCCG CGTGAGCGGC TGATGTTCGA GGTGACCGAG
GGCGAGCAGA TCCACGATGC CGAGCACCTC AAGCGGATCT TCGCCGAGTA TGGAAAGCAG
GGTTTCACCA CCGCCATAGA CGACTTTGGC GCCGGCTATT CCGGGCTCAA CCTGCTGGCC
GAATTCCAGC CGCACGTGCT CAAGCTGGAC ATGGCCCTGA CTCGCGGCAT CGACCAGGAC
CCGGTGCGCC AGGCCATCGT CGCCGGCATC GTGCTGGTGG CCCAGCGGCT GGATATCCGC
ATCATCGCCG AGGGCATCGA GAACGCCGGA GAGCGCGATG CGCTGAGCGA ACTGGGCATT
CGCTATATGC AGGGGTATCT GTTCGCGCGG CCGCAGCTGG ATCGGCTGTG CCGGCCCTGA
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| Protein sequence | MSNASPSVFP QPFRALGCAE CRNAEALGFD FTMAFQLIVD VQENRPFAYE ALVRGSQGES
AGEVLGRVND SNRYRFDQAC RVKAIEQAAT LGLLDIPDCL LSINFLPNAV YRAETCIRAT
LEAAQRFDFP RERLMFEVTE GEQIHDAEHL KRIFAEYGKQ GFTTAIDDFG AGYSGLNLLA
EFQPHVLKLD MALTRGIDQD PVRQAIVAGI VLVAQRLDIR IIAEGIENAG ERDALSELGI
RYMQGYLFAR PQLDRLCRP
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