| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2735 |
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| Symbol | |
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| ID | 5107886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3002259 |
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| End bp | 3003308 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503985 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001188222 |
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| Protein GI | 146307757 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.479552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA AACTGCAACG CCGTCTTCTC GTCTTCCTGA TCCTGCTGGC GCTGATCGTC
GGCGCCCTGC TCGCCCAGTG GCTGCTGGTC GGTCGCTATC ACGAGAGCAC CGACAACGCC
TACGTACAGG GCGAGATCAC CCGCGTCTCC AGCCAGTTGA ATGCGCGCAT CGAAAAGGTG
CTGGTGCGCG ACAACCAGCA CGTGGAGGCT GGTCAGTTGC TGGCGGTACT TGAGGACGCC
GACTTCCGCC TGGCTCGCCA GCGCGCCCTC GCCGCCTTGC AGACCCATCA AGCCGAGCGC
GCCCAGGCGC AGAGCAAGCT CGACCAGCAG GCCAGCCTGA TCGCGGCCAG CCTGGCCGAC
GTTGCCGCCA GCCAGGCCAC GCTCGAACGC GCCCAGCTCG ATCTCGGCCG CGCCCAGACC
CTGCGCAAGC CGGGTTACGT CTCCGAAGAA CGCGTCACTA CCCTGGCCGC CGACAACCGC
GTGGCCCGCT CGCAAGTGGC CAAGGCCCAG GCCGATCTGC AGGCTCAGCG TCAGCAGGTC
GCCAGCCTGG AAGCCGAGCT CAAGCGCCTG GATGCGCTGA TTCTTTCCGC CCAGGCCGAC
CTGGAGCAGG CCGACCTCAA CCTCTCGCGC ACGCAAATTC ACGCGCCGAT CAGCGGCATG
GTCGGCCAGC GCTCGGCGCG TGAAGGCCAG GTGGTGCAAA GCGGCGCCTA CCTGCTGTCG
CTGGTACCGG ACCAGGCCAT CTGGATCCAG GCCAACTTCA AGGAAACCCA GATCGGCCGC
ATGTATCCGG GGCAGACGGC CGAGTTGCTG TTCGACAGCT ATCCCGACAC GCCCATCGAA
GGCCGTATCG ACAGTCTGTT CGCCGCCTCC GGCGCGCAGT TCAGCCTGCT ACCGCCAGAC
AACGCCACCG GCAACTTCAC CAAGGTGGTG CAGCGCATCC CGGTCAAGCT GTCCTTCGCT
GCCGACAATC CGCTGCGCGG CCTGATCCGC CCTGGCATGT CGGTGGAAGT GACCGTGGAT
CTGCGTAGCG ACGAGAGCCA TGGCGGGTGA
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| Protein sequence | MPAKLQRRLL VFLILLALIV GALLAQWLLV GRYHESTDNA YVQGEITRVS SQLNARIEKV
LVRDNQHVEA GQLLAVLEDA DFRLARQRAL AALQTHQAER AQAQSKLDQQ ASLIAASLAD
VAASQATLER AQLDLGRAQT LRKPGYVSEE RVTTLAADNR VARSQVAKAQ ADLQAQRQQV
ASLEAELKRL DALILSAQAD LEQADLNLSR TQIHAPISGM VGQRSAREGQ VVQSGAYLLS
LVPDQAIWIQ ANFKETQIGR MYPGQTAELL FDSYPDTPIE GRIDSLFAAS GAQFSLLPPD
NATGNFTKVV QRIPVKLSFA ADNPLRGLIR PGMSVEVTVD LRSDESHGG
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