| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2543 |
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| Symbol | |
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| ID | 5108010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2807720 |
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| End bp | 2808730 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503787 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188031 |
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| Protein GI | 146307566 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.354483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000426703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAGCT TCACCCTACC CGCGCAGTAC CTGCGGCAGA TCGTCGGCCT GGTCGGCGAC
ATGGGCGCCG ACGTGCCGGG CTGGCTGGCG CGGGCGCAAC TGCACGAGGC GCGACTGGGC
GACAGCGACC TGCACCTGTC GCTGGCCACC TTCGAGCGCT TGATCGAGGA CGCCATGGCG
CGTACCGACG AGCCGGCCTT CGGCCTGCTG GTGGGCGAGC GCCTGGTGGT CAATACCCAC
GGCCTGCTGG GCTATGCGGC GATGAACAGC ACCACCCTGC GCCAGGCCGC CCAGCTGATC
GAGCGCTACA TCGCCCTGCG CACCAGCCTG GTGAGCATCC GCCTGGTGGA GACGGAGGGG
GAGGCGCGCC TGGTCTTCGC CGAGGCGGCG CCGCTGGGCG GCATCGCCCG GCCGGTGCTG
GAGGCGGTGA TCCTGGCGAT CAAGAACGTG CTGGACTTCA TGACCCTGGG CAGTTGCCCG
CTGGAGCGGG TCAGCTTCGC CTTCGCCAGG CCCGCCTACG CCGGACTGGC CCATCAGCTG
TGCCGCTGCG AGGTGCGCTA CGACGCCGAC TGGAGCGGCT TCGTCCTGCC CGCGCAGAGC
ATCGACCAGC CGCTGAAGAC CGCCGACGCC GCCAGCTTTC GTGATACCGA ACAGATACTC
CAGCGCGAAC TGGCCAAGCT CACCGCCGAG CAGTCCATGA GCAGCCGGGT ACGCCGGGTG
CTGCTGGAAA AACAGGGTGG CTTTCCCTCG CTCAGCCTTA CCGCCCGCCT CTTCCACCTG
ACCCCGCGCA CCCTGCACCG CCGCCTGCAG GCCGAAGGCA CCTCGTTCAA GAGCCTGCTC
GAGGAGGTGC GCCACACCCT GGCCCAGGAG CATCTCAAGG CCGGGCGCAT GACGGTGGAA
GAGATCGCCT ACAGCCTGGG CTACACCGAC CTGGCCAACT TCCGCCGCGC CTTCAAGCGT
TGGCAGCGCC AGTCGCCCTC GGCCTATCGC GCCGAACAGC AGGCGCTGTA G
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| Protein sequence | MQSFTLPAQY LRQIVGLVGD MGADVPGWLA RAQLHEARLG DSDLHLSLAT FERLIEDAMA
RTDEPAFGLL VGERLVVNTH GLLGYAAMNS TTLRQAAQLI ERYIALRTSL VSIRLVETEG
EARLVFAEAA PLGGIARPVL EAVILAIKNV LDFMTLGSCP LERVSFAFAR PAYAGLAHQL
CRCEVRYDAD WSGFVLPAQS IDQPLKTADA ASFRDTEQIL QRELAKLTAE QSMSSRVRRV
LLEKQGGFPS LSLTARLFHL TPRTLHRRLQ AEGTSFKSLL EEVRHTLAQE HLKAGRMTVE
EIAYSLGYTD LANFRRAFKR WQRQSPSAYR AEQQAL
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