| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2280 |
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| Symbol | |
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| ID | 5108515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2511595 |
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| End bp | 2514339 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503522 |
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| Product | maltooligosyl trehalose synthase |
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| Protein accession | YP_001187770 |
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| Protein GI | 146307305 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0184477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00895039 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGATC TGCGCGCGAC CTTGCGCCTG CAACTGCACA AAGGCTTCAC CCTGCACGAC
GCCACGGCCC TGGTGCCCTA CATGGCGCAG CTGGGCATCA GCCACCTGTA CGCCTCGCCG
GTGCTCACCG CCCGTCCCGG CTCGATGCAC GGCTACGACG TGATCGATCC GAGCCAGGTC
AACCCCGAGC TCGGCGGCGA AGCCGCGCTG GTGCAGCTGG CCGATGCCCT GCATGCGCGC
GGCATGGGAC TGATCCTGGA CATCGTGCCC AACCACATGG CGGTCGGCGG CGAAGGCAAC
CCCTGGTGGC TCGACGTGCT CGAATGGGGC CGCGCCAGCC CCTATGCCGC CTTCTTCGAC
ATCCAGTGGC AATCCCATGA CCCGCTGCTC AGCGGCCAGC TGCTGGTGCC CTTCCTGCGC
AGCGATTACG GCGAAGCCCT GCGCGAGGGC ACCCTGCAGC TGGCCTTCGA TGCGCGCCGC
GGGCGGTTCC ACGCCCAGCA TTTCGAGCAT CGCCTGCCGC TGACCCCGGC GAGCTACGAC
GAGATCCTGC GCGGCGCGGA AGACCCTGCG CTGCGTGAGC TGGGCCGGCG CTTCGCGCGT
CTCGGCGATG GCCCGCAAGC GCGCGGCCAG GCCGAGAGCC TGTGCGCCGA ACTGAGCCGC
CATGCCGAGC AGGCGCGGCA GCTGCTCGCA CCCTTCCAGC AGGGCGACGA GGCCGGCCAG
CAGCGCCTGC ACCGGCTGCT CGAACGCCAG CATTACCGCG TCGCCAGCTG GCGCACCGCC
GCCGACGACA TTAACTGGCG GCGCTTCTTC GACATCAACG AGCTGGGCGC CCTGCGCGTG
GAGCGCGCCG ATGTGTTCGA GCAGACCCAT GCCAAGGTTT TCGAGCTGGT CGAGCGCGGC
CTGGTCGATG GGCTGCGCAT CGATCACATC GACGGCCTGG CCAACCCGCG CGCCTATTGC
AGCCGCCTGC GCCGCCGCAT CGCCCGGCTG CGTGGCGGTG CGACGCTGCC GCTGTTCGTG
GAGAAGATCC TCGGCCACGG TGAGCAGCTG CCGGCGAGCT GGCCGGTGGC CGGCACCACC
GGTTACGAGT TCATGAACCA GGTTTCCCTG CTGCAGCATG ATCCCCATGG CGAGCCGGTG
CTTGGCGCCT TGTGGGGCGA AATTAGCGGC CGCCCCACTG CCTTCGCCGA AGAGGTGCAG
CAGGCGCGAC GCCTGGTGCT CGACAGCTCG CTGGCCGGTG ATCTGGAGGA AGTCGCCCAG
CGCCTGCTGC AGGTCGCCCG GCATGACATC GCCACCCGCG ACCTGACCCT GGGCGCGATT
CGTCGGGCCT TGCGCGAGCT GATCGTGCAC TTTCCGGTGT ATCGCACCTA TGCCCAGGCC
TGCGGGCGCT CGCCGCAGGA TCGGCAGTTC TTCCAGCAGG CCCTGGAGGG GGCGAAACAG
ACCCTGGCCG AGGCGGACTG GCCGCTGCTG CAGCATCTCG ACGACTGGCT CGGCGGCGCC
TGCCTGCGCG CGCAACCGCC CGGTCGCGCC CGCCGCCTGC GGGCCCTGGC CCTCACCCGC
TTCCAGCAAC TGACCTCGCC GGTGGCAGCC AAGGCCGTGG AGGACACCGC GCTGTACCGC
GCCGGCGTGC TGCTGTCGCG CTACGACGTG GGCTTCGATG CCGAGCATTT CAGCGCCAGT
GTCGAGCAGT TCCACCAGGC CTGCCGCGCA CGGGCCGCCC AGCACCCGTA CAACCTGCTG
GCCACCGCCA CGCACGACCA CAAGCGCGGC GAGGATTGCC GCGCGCGCCT GGCGGTGCTC
AGCGAGCGAG CGGCCTGGTA TGCCGAACGG GTGCGCAACT GGCGGCAACT GGCGCAACCG
CTGCACTCCG ACAACCTGCC GCAGGCGCCG GATGGCGGCG AGCAGGCCAT CCTCTACCAG
GCCCTGATCG GCAGCTGGCC GCTGGGCCTG CAGGCCGGGG ATGACGCCGG CCTGCAGCAG
TACCTGCAGC GCTTGCTCGA CTGGCAACGC AAGGCCCTGC GCGAGGCCAA GCTCAACACC
GCCTGGAGCG CGCCGAACGA CGATTACGAA ACGGCCTGCG CGGATTTTCT GCGCCGCCTG
CTCGCCGAGC CCGCCGGCCT GGCCCTGCGC AGCGAGCTGG CTGCCACCGT CGACGCCATC
GCCCCGGCCG GTGCGCTCAA CGGCCTGGTG CAATGCCTGC TGCGCCTGAC CGCGCCCGGC
GTGCCCGATC TCTACCAGGG GTGCGAGTTC TGGGATTTCA GCCTGGTCGA CCCGGACAAC
CGCCGCCCGG TGGACTACCA GGCGCGTCAG GCCGCGCTGG AAGCCGGCGA CACGCCTGCC
GACAAGCTGG CGAGCTGGCA GGACGGACGC ATCAAGCAGT GGCTGATTCA GCGCGTGCTG
GCTCTGCGCG CCGCCGAACC GGCGCTGTTC GCCCAGGGCC AATACCGCCC GCTGGCGGTC
GAGGGCGAGC ACGCCACCCA GGTAGTGGCG TTTCTACGCA GCCATGGCGA CCAGCATCTA
CTGGTGGTCG CCCCGCGCCT GAGCGCCGGT CTGCTCGCCG ATCACCCCGT GCCGCACGTG
CCGCCGCAGC GCTGGGGCGA CACCCGCGTG GTGCTGCCCG AAGAGCTGGC CATCGGTCAG
GCGAGTGGCC TGCTCGCTCC TTGCTCCGCT GCATCTCCCC AGGGCCTGCG GCTGTCCGCC
GTGCTGGCCG AGTTTCCCGT CAACCTGATT CGTCTTACCT CGTGA
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| Protein sequence | MSDLRATLRL QLHKGFTLHD ATALVPYMAQ LGISHLYASP VLTARPGSMH GYDVIDPSQV
NPELGGEAAL VQLADALHAR GMGLILDIVP NHMAVGGEGN PWWLDVLEWG RASPYAAFFD
IQWQSHDPLL SGQLLVPFLR SDYGEALREG TLQLAFDARR GRFHAQHFEH RLPLTPASYD
EILRGAEDPA LRELGRRFAR LGDGPQARGQ AESLCAELSR HAEQARQLLA PFQQGDEAGQ
QRLHRLLERQ HYRVASWRTA ADDINWRRFF DINELGALRV ERADVFEQTH AKVFELVERG
LVDGLRIDHI DGLANPRAYC SRLRRRIARL RGGATLPLFV EKILGHGEQL PASWPVAGTT
GYEFMNQVSL LQHDPHGEPV LGALWGEISG RPTAFAEEVQ QARRLVLDSS LAGDLEEVAQ
RLLQVARHDI ATRDLTLGAI RRALRELIVH FPVYRTYAQA CGRSPQDRQF FQQALEGAKQ
TLAEADWPLL QHLDDWLGGA CLRAQPPGRA RRLRALALTR FQQLTSPVAA KAVEDTALYR
AGVLLSRYDV GFDAEHFSAS VEQFHQACRA RAAQHPYNLL ATATHDHKRG EDCRARLAVL
SERAAWYAER VRNWRQLAQP LHSDNLPQAP DGGEQAILYQ ALIGSWPLGL QAGDDAGLQQ
YLQRLLDWQR KALREAKLNT AWSAPNDDYE TACADFLRRL LAEPAGLALR SELAATVDAI
APAGALNGLV QCLLRLTAPG VPDLYQGCEF WDFSLVDPDN RRPVDYQARQ AALEAGDTPA
DKLASWQDGR IKQWLIQRVL ALRAAEPALF AQGQYRPLAV EGEHATQVVA FLRSHGDQHL
LVVAPRLSAG LLADHPVPHV PPQRWGDTRV VLPEELAIGQ ASGLLAPCSA ASPQGLRLSA
VLAEFPVNLI RLTS
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