| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2152 |
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| Symbol | |
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| ID | 5109492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2374539 |
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| End bp | 2375366 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503396 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187644 |
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| Protein GI | 146307179 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.488211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.369795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCA TGTTTGACGA CGACTTTCCC GACGATACCG CGCAGACCGA GCGCACCCGC
CAGATCATCC TGCGCTATCA CCTGAGCTGG AAGCAGCGCG ATCTGGAGGC GGTGCTGGCG
CTGTATCACC CGCAGGTGGA GTACAACGAT TTCTATCAAC AGCGCAGCAT GCAGCTGGCC
GAGCTGCGCG CCTACGTCGC CGGCAACCTG CCGCGCCATC CCGGCGAGTC GCTGGAGCAC
TTCGACCGCA TCCGCATCGA CGGTCACACC GCGTTCATCC AGTACCGCAC CCGTGTGCAA
GGCAGCGAGG GGCTGGTGTC GTTCTGCACC GGCGAGGCCA TCACCGTACG CGACGGGTTG
ATCTGGCGCG TCAACGAGTA CGCCACCCTG GTGCGCGAGC AGCAGCCGCT CGATGCGCCC
GGTGCGCGGC CGGCGATCAG TCGCCTGGGG CTGTCGAGCC GCCAGCTCGG GCAGATGGCG
CAGGACCTGC AGGACTATTT CCAGCGCAGC CAGCCCTTTC TCGACCCCGA GCTGAACCTG
CAGCAGGTGG CGACGGCCAC CGGCTACAGC CGCAACCAGG TTTCCCACCT GCTCAATCAG
GTGCTCGGTG AAAGCTTTTA CCGTTACGTC AATCGCGCGC GCCTGCAGTA CCTGCTGGCG
GGGCTCGAGG CTGACAGCGA CCCGGTGCGT ATCGACGAGC TGGCATTCGC TGCCGGCTTC
AACTCGCTAT CGGCGTTCTA CAGCTGCTTT CGGCGTCATA CCGGGCTTTC TCCCAAGGCC
TATCTCAAGC AGCTCTCCTT GCGGGCGCGC ACACAAGACG GCCGCTGA
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| Protein sequence | MPTMFDDDFP DDTAQTERTR QIILRYHLSW KQRDLEAVLA LYHPQVEYND FYQQRSMQLA
ELRAYVAGNL PRHPGESLEH FDRIRIDGHT AFIQYRTRVQ GSEGLVSFCT GEAITVRDGL
IWRVNEYATL VREQQPLDAP GARPAISRLG LSSRQLGQMA QDLQDYFQRS QPFLDPELNL
QQVATATGYS RNQVSHLLNQ VLGESFYRYV NRARLQYLLA GLEADSDPVR IDELAFAAGF
NSLSAFYSCF RRHTGLSPKA YLKQLSLRAR TQDGR
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