Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2139 |
Symbol | |
ID | 5109479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2359041 |
End bp | 2359796 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503383 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001187631 |
Protein GI | 146307166 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.821135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.237268 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGC GCACCACCCT CTCCGCTTTT GCCCTCTCCA GCGCCGTGCT GCTAACCGGC TGCCAGAACA TGTCTCCCGA CGCCATGCTG CAATCCGGCC TGATGGCCGT GCAGGCCGCG ACTCTGAGCG ATGCCGAAGT GAAAAGCATG TCCGACCAGG CCTGCGCCGA AATGGACGCC GCAGCCAATG TCGCCGGCCC GACCAGCCCC TACGCCAAGC GTCTGGACAA GATCGCCAGC AACCTCGGCC ATCAGATCAA CGGCACGCCG ATCACCTACA AGGTCTACCT TGCCGACGAC GTCAATGCCT GGGCCATGGC CAACGGCTGC GTGCGCGTCT ACAGCGGCCT GATGGACCTG ATGACCGACA ACGAAGTGGA AGGCGTGCTC GGCCACGAAA TCGGTCACGT CGCCCTCGGC CACACCAAGA AGGCCATGCA GACCGCCTAC GCCACTGCCG CCGCACGCAA TGCGGCCGCT GCTTCGGGCA ATGGCACCGT CGCTGCCCTG TCCGCCTCGC AGCTTGGCGC CATGGGCGAA CAGCTGGTCA ATGCGCAGTT CTCGCAAAGC CAGGAAACCG CGGCCGACAA CTTCTCCTTC GACCTGCTGA CGCAGCGCAA CATCCCGCGT GAAGGCCTGG TCACCGCGTT CGAGAAACTG GCCAAGCTGG GCGGCGGCGA AAGCAGCATG TTCGACTCGC ATCCGGGCTC CCACGACCGC GCCAACAACA TGCGCACCCG TTTGGCGGCC AAGTAA
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Protein sequence | MQLRTTLSAF ALSSAVLLTG CQNMSPDAML QSGLMAVQAA TLSDAEVKSM SDQACAEMDA AANVAGPTSP YAKRLDKIAS NLGHQINGTP ITYKVYLADD VNAWAMANGC VRVYSGLMDL MTDNEVEGVL GHEIGHVALG HTKKAMQTAY ATAAARNAAA ASGNGTVAAL SASQLGAMGE QLVNAQFSQS QETAADNFSF DLLTQRNIPR EGLVTAFEKL AKLGGGESSM FDSHPGSHDR ANNMRTRLAA K
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