Gene Pmen_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1905 
Symbol 
ID5110033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2096319 
End bp2096570 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content62% 
IMG OID640503136 
Productsulfur transfer protein SirA 
Protein accessionYP_001187399 
Protein GI146306934 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00381161 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.533797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCCTGACCCT CAACCACGAT GACCTGCTCG ACGCCAGCGG GCTGAATTGC 
CCGGAGCCGG TGATGATGCT GCACAACAAG GTGCGCGACC TGTCGCCGGG CGGCCTGCTC
AAGGTGATCG CAACCGACCC CTCGACCCGC CGTGACATCC CCAAGTTCTG TGTGTTTCTC
GGCCATGAAC TGCTCGGTCA GGCCGAGGAA GACGGCACCT ACCTGTACTG GATTCGCAAG
AAGGCCGATT AG
 
Protein sequence
MSEALTLNHD DLLDASGLNC PEPVMMLHNK VRDLSPGGLL KVIATDPSTR RDIPKFCVFL 
GHELLGQAEE DGTYLYWIRK KAD