| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1876 |
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| Symbol | |
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| ID | 5110005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2067652 |
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| End bp | 2068239 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640503107 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187371 |
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| Protein GI | 146306906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.851217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGT TGCGTAAATT GCTTGTTCTT GGGGCTGGCG GTCACGGCAA GGCCGTCGCG
GAAGCTGCGT TACTTTCTGG TGAGTGGCAG CAGGTAGTTT TCCTCGACGA CAGATGGCCT
GAGCTGAAGG TTGTTTTTGG CTTGCCTGTG GTCGGTTGCC TGAGTCATTT GGCTGAAAAT
GCAGGGGCAG CTGACGGAGC TATCGCGGCG GTTGGTAATA ATTGCTTGCG CCGTGCCTGG
CAAGGAAAGA TCACCGCTGC TGGCATTTCG CTGGTCAGCG TAGTTCACCC TCGTGCTTGC
GTGAGCGCTT CAGCTTTAGT CGGCCCTGGT TCAGCCATCA TGTCACTGGC AATCGTGGGC
ACTGAGGCTC GCTTGGGGCA AGGGGTAATC ATCAATGCGG GAGCGGTGGT CGACCATGAT
GCGACTTTGG ACGACTATGT GCACCTTGGT GTCGGCGTCT GCTTGGCTGG CGGAGTCGCG
GTCGGCGAAG CTGCTTGGCT ACAGGCAGGT TGCAGTGCTG GATATGGTGT CGTTATCGAG
CCGGGTTTGG TTATCAAGCC TGGCCAGGCT TTGATTGCCA AGGATTGA
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| Protein sequence | MSQLRKLLVL GAGGHGKAVA EAALLSGEWQ QVVFLDDRWP ELKVVFGLPV VGCLSHLAEN
AGAADGAIAA VGNNCLRRAW QGKITAAGIS LVSVVHPRAC VSASALVGPG SAIMSLAIVG
TEARLGQGVI INAGAVVDHD ATLDDYVHLG VGVCLAGGVA VGEAAWLQAG CSAGYGVVIE
PGLVIKPGQA LIAKD
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