| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1739 |
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| Symbol | |
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| ID | 5109319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1916736 |
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| End bp | 1917983 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502970 |
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| Product | outer membrane porin |
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| Protein accession | YP_001187235 |
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| Protein GI | 146306770 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGA CTCCCCTCGC CCGCGCCGTG GCTCTCGCCA CGCTGGGCGC CAGCCTCACC
ATGCCAAGCC TGGCTCACGC CGACTTCATT GGTGACAGCA AGGCCACCCT GGAACTACGC
AACTTCTACA TGAACCGCGA TCTGCGCGAG ACCACCGCGG CTCAGCAATC CAAACGCGAA
GAGTGGGCAC AGGGCTTCAT ACTCAAGGCC GAATCAGGCT TTACCGAGGG CACCGTTGGT
TTTGGTCTGG ACGCTTACGC CGGCCTGGGC CTGAAACTGG ACTCCTCCGA CGAGCGCGCC
GGTACCAACC TGCTGCCCAA CGCCTTCGGC AATGAAGGGC CGGACGAATA TTCCGAAGCC
ACCGGGGCGG TCAAGGCGCG TATCTCCAAG ACCGTGGCCA AGGTTGGCGG CCTGATGCCC
AAGCTGCCCA TCGTTGCTTC CGGCGACTCG CGCCTGCTGC CCCAGGTCTT CACCGGCGGC
ATGCTGACCT CGCAGGAGAT CGACGGCCTG ACGCTCAACG GCGGGCAACT GCGCGAAGTG
AATTTCCGCA ACTCCACCGA CCGCCAGGAC ATCACTGCCA CCAACGTGGG CGGCAGGAGC
GATCGCTACA ACTATGCCGG TGGCGACTAC AAGTTCAACG GCGGCAACAC CACGGTCGGC
CTGTGGTACG GCGAACTGGA AGATATCTAC GACCAGAAGC TGTACAACCT GATCCATGTG
CAGCCGATCG GCGACTGGAA GCTGGGCGCC AACCTGGCCT ATTTCGACTC CCAGGACAAC
GGCCGCAAAC TCGGCGGCAA GCTGGACAAC GACCTGACCT CGGTCAACCT GTGGGCCGGC
ATCGGCGCCC ATACCTTCCG CGTGGGCTAT CAGAAGGTCG GTGGTGACAA TGCCTTCCCG
TTCCTGAACG AAACCGATCC GTACATCGTC AACTACCTCC AGATTCTCGA CTTCACCCGC
AAGGACGAGA AATCCTGGCA GGCGCGCTAT GACATCAACT TCGCCAGCTA CGGTATTCCT
GGCCTGACCG CCTTCGTGCG CTACGTGACC GGCGACGGCT TCGACGGTGT AGGCGGCGTG
AGCGGCAAGG AATGGGAACG CGATGTGGAT ATCAGCTACA TCATTCAGGA AGGCCCGCTG
AAGAACCTCG GCGTGCGCTG GCGTAACGCG ATGGTGCGTT CCAACGCGAG CATCGGCGAC
CTGGACGAGA ACCGTCTGAT CGTCAGCTAC ACCATCCCGC TGATGTAA
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| Protein sequence | MSKTPLARAV ALATLGASLT MPSLAHADFI GDSKATLELR NFYMNRDLRE TTAAQQSKRE
EWAQGFILKA ESGFTEGTVG FGLDAYAGLG LKLDSSDERA GTNLLPNAFG NEGPDEYSEA
TGAVKARISK TVAKVGGLMP KLPIVASGDS RLLPQVFTGG MLTSQEIDGL TLNGGQLREV
NFRNSTDRQD ITATNVGGRS DRYNYAGGDY KFNGGNTTVG LWYGELEDIY DQKLYNLIHV
QPIGDWKLGA NLAYFDSQDN GRKLGGKLDN DLTSVNLWAG IGAHTFRVGY QKVGGDNAFP
FLNETDPYIV NYLQILDFTR KDEKSWQARY DINFASYGIP GLTAFVRYVT GDGFDGVGGV
SGKEWERDVD ISYIIQEGPL KNLGVRWRNA MVRSNASIGD LDENRLIVSY TIPLM
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