| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1470 |
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| Symbol | |
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| ID | 5109759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1631079 |
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| End bp | 1631534 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502699 |
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| Product | positive regulator of sigma E, RseC/MucC |
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| Protein accession | YP_001186967 |
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| Protein GI | 146306502 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.51254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAG AACAGGGGCG TGTGGTGGCG CTCGAGCCCG GCGCCGTCTG GGTGGAGACG
CTACGCAAGA GCACCTGCTC GAGTTGTTCG GCCAATGCCG CTTGCGGTCA GGGGCTGATG
GATCGCCTGG GTGTCGGGCG TCAGCGCGGC TATGTGCGCG CCCTCAGCGA CAGTCCGCTG
TCGGTTGGCG ACACCGTGGT GATCGGTGTG CGCGAAGATC TTCTGGTGCG TAGTTCCCTC
CTGGTTTATC TGCTGCCTCT GTTAGGGCTG CTGGCTGCTG CACTGGCGGC GGATGGCCTT
GGGCTGAGTG AGCCGCTGGT CATCCTGGCC GGTCTGCTCG GCCTGTTCTT CACTTGGCTA
CTGGTTCGCT GGCGCGCTTC GCGCGTTGCC GAGAACCCCG CGTTGCAACC GGTTGTCCTA
CGTACGCTGC TGGTATCCGT GCCAGCGGCG GGTTGA
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| Protein sequence | MIEEQGRVVA LEPGAVWVET LRKSTCSSCS ANAACGQGLM DRLGVGRQRG YVRALSDSPL
SVGDTVVIGV REDLLVRSSL LVYLLPLLGL LAAALAADGL GLSEPLVILA GLLGLFFTWL
LVRWRASRVA ENPALQPVVL RTLLVSVPAA G
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