| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1422 |
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| Symbol | |
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| ID | 5109711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1584512 |
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| End bp | 1585144 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502651 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001186919 |
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| Protein GI | 146306454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0642505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCA CAAGGAACGC TGTACCCCTG ATTCTGGCCA GTACCCTGTT GACCGGTTGC
GCCGGCTTGC AGAAATCCGA CTGGCCCACC TGTGCGGCGG TGGGCGGTGT CGGCGGTGCT
GCGCTGGGTG CGATCGAAAG CTCCACCTGG GCGGGTGGCG GCGCCGTGCT TGGTGCCGGC
ATGGCGGCTG CCTACTGTTG GGTGCATGGC GCCGATGCGC AGCAGGTTGC CGTGGCCGAG
GAAGTGGTCG TCGAAGAAGT CGTGGTCGCC GAACCTCGGG CCGAGGCGGT GCGGGTCGAG
CTGGATGTCA AGTTCGACTT CGACAAGTCT CAGGTCAAGC AGGAAAGCTA CGGCGACATC
AAAGCGCTGG CCGACTTCAT GAAGCAATAC CCGCAGACCA GCACCGTGGT CGAAGGGCAC
ACCGACTCGG TGGGCAGTGA CGCGTACAAC CAGGGCCTGT CCGAGCGCCG CGCCAATGCG
GTGCGCGAGG TACTGGTCAA CCAGTACGGC GTCGAGTCCA ATCGCGTCCA GGCAGTGGGT
TATGGCGAAA GCCGCCCGGT TGCCGACAAC GCCACCGCCG AAGGCCGTGC CATCAACCGT
CGCGTAGAAG CCGAGGTCGA GGCTCAGCCC TAA
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| Protein sequence | MSITRNAVPL ILASTLLTGC AGLQKSDWPT CAAVGGVGGA ALGAIESSTW AGGGAVLGAG
MAAAYCWVHG ADAQQVAVAE EVVVEEVVVA EPRAEAVRVE LDVKFDFDKS QVKQESYGDI
KALADFMKQY PQTSTVVEGH TDSVGSDAYN QGLSERRANA VREVLVNQYG VESNRVQAVG
YGESRPVADN ATAEGRAINR RVEAEVEAQP
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