| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1403 |
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| Symbol | |
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| ID | 5109692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1567071 |
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| End bp | 1567646 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502632 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_001186900 |
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| Protein GI | 146306435 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.466807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGG TTCTCGTCGC CGTACTCGCC CTGCTCGGCC TGTGCCTGAT CGCCGGCGCC
ATCCTGGGTT TCGCCGCGGT GCGCTTCAAG GTCGAGGGCG ACCCCATCGC CGAGCAGATC
AACGCCCTGC TGCCGCAGAC CCAGTGCGGC CAGTGCGGCT ACCCCGGCTG CAAGCCCTAC
GCCGAGGCGA TCGCCGGTGG CGACAAGATC AACAAGTGCC CGCCCGGCGG CGAGGCGACC
ATCCAGGCGC TGGCCGACCT GCTGGACGTC GAACCCGAGC CGCTAGATGC GGTGGAAGGC
GAGAAGCCGC AGATGGTCGC GTTCATCCGC GAAGCAGAAT GCATTGGCTG CACCAAGTGC
ATCCAGGCCT GCCCGGTGGA CGCCATCGTC GGCGCGGCGC GGCAGATGCA TACGGTGATC
GTCAGCGAAT GCACCGGCTG CGACCTGTGC GTCGAACCCT GCCCGGTGGA CTGCATCGAC
ATGATCGAAG TCGGTAGCAC CGTGCAGAGC TGGAAATGGG ACAAACCGCT GGCGCCCGGC
CAGTTGATCG CCAGCGACCG GGAGCAGGCG GCATGA
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| Protein sequence | MSLVLVAVLA LLGLCLIAGA ILGFAAVRFK VEGDPIAEQI NALLPQTQCG QCGYPGCKPY
AEAIAGGDKI NKCPPGGEAT IQALADLLDV EPEPLDAVEG EKPQMVAFIR EAECIGCTKC
IQACPVDAIV GAARQMHTVI VSECTGCDLC VEPCPVDCID MIEVGSTVQS WKWDKPLAPG
QLIASDREQA A
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