Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1069 |
Symbol | |
ID | 5107728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1206786 |
End bp | 1207541 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640502293 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001186568 |
Protein GI | 146306103 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA TCTGGCTGAC CGGCGCCAGC AGCGGCATCG GTGCCGCACT GGCGGAAGAA CTGCTGCGCG CCGGCCACCG CCTGGCGCTC AGCGCGCGCA GCAGCGGCCC GCTGCAGGCG TTCGCCGCCC GCTATGGCGA GCGGGTGCTG GTGGCCCCGG GCGACCTGAC CGACGCCGAG CAGGTGCGCG CCATCGGCGA GCGCATCGAG CAGGTGTGGG GCGCCCTGGA TTGCGTGATC CTCAATGCCG GCACCTGCGA GTACGTCGAG GTGCGCCAGT TCGAGGCCGC GATGATCGAG CGGGTGATGC GCGCCAACCT GTTCTCCGCC GGCTACTGCC TCGAGGCCGC CCTGCCCCTG CTGCGCCGCG GCGAAGGCCC GCATCTGGTC GGCGTCGGCA GCTCGGTGAC CTTCATGCCG CTGCCCCGTG CCGAAGCCTA CGGCGCCTCC AAGGCAGCCA TGCGCTACCT GCTGCAGACC CTGCGCATCG ACCTGGCGGC CGAGGGCATC GACGTTACCC TGGTCAGCCC CGGTTTCGTC GACACGCCGC TGACGCAGAA GAACGACTTC CCCATGCCCA TGCGCTGGCC GGTGGAGCGC GCCGCACGGT ACATCGCCGA ACGCCTGGAC AAGCGCCCGC ACGAAATCGC CTTCCCTACT CCCTTCATCG CCGTACTGAA ACTGCTCGGC AGCCTGCCCA GCAGGCTGCA ACTGGCCATC GGCCGTCGCC TGGCGCGTAA CGAGGACACT CCATGA
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Protein sequence | MKRIWLTGAS SGIGAALAEE LLRAGHRLAL SARSSGPLQA FAARYGERVL VAPGDLTDAE QVRAIGERIE QVWGALDCVI LNAGTCEYVE VRQFEAAMIE RVMRANLFSA GYCLEAALPL LRRGEGPHLV GVGSSVTFMP LPRAEAYGAS KAAMRYLLQT LRIDLAAEGI DVTLVSPGFV DTPLTQKNDF PMPMRWPVER AARYIAERLD KRPHEIAFPT PFIAVLKLLG SLPSRLQLAI GRRLARNEDT P
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