Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0929 |
Symbol | |
ID | 5108787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1049730 |
End bp | 1050185 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640502146 |
Product | hypothetical protein |
Protein accession | YP_001186429 |
Protein GI | 146305964 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0092322 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.674823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCC GTCCCTTGCC GGCCCAGGCA CCCGCTACGC TGCTACGCGA AGCCAAGCCC CTGAAAGCGC TGTTCGGTCA GGCGCAACGC CTGTCCAACC TGCAGCGTCT TGTCGAAAGC CAGCTACAAC CAGCCGCCCG GGAGCACTGT CATGTAGCGT CCTGGCGTGA CGGCTGTCTG CTATTGATAG TGACCGATGG CCACTGGGCA ACACGCCTGC GTTATCAGCA GAAACGACTG CAACGACAAC TGCAGGCACT CGAAGAGTTC GCGACCTTAA CGAAAATCCT GTTCAAGGTG CAACCTCAAG GCGGGCAAAA TCGTGGAACC GGTCGCACCC TGCAGCTGTC CAAGGGCGCC GCACAGAACA TCCAGGCCAG TGCCGAAGGC ATCCGCGACC CCCGGCTACG GGCGGCGCTT GAGCGCCTGG CGAGCCATAC GCAGAAAGAC GAATAG
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Protein sequence | MTFRPLPAQA PATLLREAKP LKALFGQAQR LSNLQRLVES QLQPAAREHC HVASWRDGCL LLIVTDGHWA TRLRYQQKRL QRQLQALEEF ATLTKILFKV QPQGGQNRGT GRTLQLSKGA AQNIQASAEG IRDPRLRAAL ERLASHTQKD E
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