Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0706 |
Symbol | |
ID | 5109036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 781943 |
End bp | 784729 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640501919 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001186206 |
Protein GI | 146305741 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.357941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGGC TCAGGATTGC CATCGGACTA CTCGCCAGCC TGCTGTTGCT CGGCCTCAGC CTGACAGCCA GCGCCGCCCC GTCCTCGACG GGCACCCAGA GCTGGTCCTA TCTGGTCGAC GCCAGCGCCC GCCTGGGCCT GGAAGAAATA CGCGCCCAGC GCCAGCAGTT CAAGCCGCTT AGCAAACAGT CCTTCACCTT CCCGCCGAGC CAGCACGCCG TCTGGCTGCG CGTCGAACTC GCCCCGCAAC AGCAGCCCGC CTGGCTTTGG GTCTTTTCGC CGCGGGTGCA GTACCTCGAC TACTACCTGC TCAGGGATGG CCAGCTGGAG CAGAACCTGC ACACCGGCGA AGCCATGCCG CTGGACTCGC GTCCGCTGCC TTCGCGCTTC TACCTGATGC CCCTGCCCAA CGACGGCCAG GCCCGCGTCG CCTACGTCCG GCTGACGTCC AACCATCCGC TGATGACCTG GTTCAAGGTC ATGGATCAGG CCGAACTGGT CAGCCTGGAA AAGCCCGCCT ACCTCTACGG CATGCTGTTC GGCGCCCTGC TGCTGCTGAC CCTGTACAAC CTCATCCGCT TCTTCTACAG CCGCAGCGCC ACCGGTCTGT GGCTGGCAGG GGTGAATATC GGTCTGGCGG TGTGTTCGTC GGCCAATCTC GGCATTTTCG CCCAGTGGTT GCCCAGCCTG GGCTACAACC AGTCGCTGAT CGCCGATCTG TCGGCGCTGT TCGCCGCCTT CAGCGCCCTG GCCTTCGGCC TGAGCTTCTT CCATGGCACC ACGGTGCAGC ACAGCCCGCT CAACCGCCTG CTGCAGGGCA ACGCGCTGCT GTTGCTGGTG TATGCGCTGT GCATCGCCCT GACCGGGTTG TTCTGGTTCA GCTCGCTGGT CTATCTGCTG GTGGCGTTGA GCAGCCTCAA CCTGCTGCTG GTGGGCAGCC TGCACTGGCG CGCCGGTTAC CAGCCGGCGC GGCTGATCGC CGTGGGCATG CTGGTGTTCA ACCTCGGCTT CGGCTTCTTC GTGCCGGTGC TGCTCGGCTT CGATCAGCTC AACCCGGGCT GGCTGGTGCT CGGCGTGTTC AGCGTGGCGA CCCTGGCCGG TCTGATCCTC AGCGTCTCGC TGACCGAACG TCAGCGGCAG ATCACCTCCG ACACCCTCGA CAGCCGCACC GCGCTGGCCG CCAGCAGCGC CGAGCTGCGC GCCAAGGCCG AGTTCCTGGC CAAGATCAGC CACGAGATCC GTACGCCGAT GAACGGCGTG CTGGGCATGA CCGAACTGCT GCTGGGCACG CCGCTGTCGG CCAAGCAACG CGACTACGTG CAGACCATCC ACAGCTCGGG CAACGAGCTG CTCACCCTGA TCAACGAAAT TCTCGACATT TCCAAGCTCG AATCCGGGCA GATCGAACTG GACGACGTGC AGTTCGACCT CGGCGCGCTG ATCGAGGACT GCCTCGACAT CTTCCGCGCC AAGGCCGAGC AACAGAAGGT GGAGCTGATC AGCTTCATCC AGCCGCAGGT GCCGCGGGTG ATCAGCGGTG ACCCCACGCG CCTGCGCCAG GCCCTGCTGA GCCTGCTGGA CAACGCCTTC AAGCAGACCG ACGAGGGCGA GATCCTGCTG GTCGCGGCAC TCGACAGCAG CGACGGCAAG CACCGCCTGC GCATCGCCGT GCAGGACAGC GGCCGGCCGC TGCTGCCGGA AGAGCGCGAC GCCCTGCTCA ACGCCGAACT GCAGAGCCGC GACTTCCTCT CCGCCACCCG CCTGGGCGGG CGCCTCGGCC TGATCATCGC GCGCCAGCTG GTGCGCCTGA TGGGTGGCGA GTTCGGCATT CAGGGCAGCA GCAACCAGGG CACCACCCTG TGGCTGGCCC TGCCGCTGGA CCCCGCCCGC CTGGAACAGC CGGAAACCGA TCTGGACAGC CCGCTGCAGG GTGCGCGCCT GCTGGTGGTG GACGACAACG ACACCTGCCG CAAGGTGCTG GTGCAGCAAT GCAATGCCTG GGGTCTGCAG GTCAGCGCCG TGCCCTCCGG CAAGGAGGCC CTGGCCCTGC TGCGCACCAA GGCGCACATG CGCGAGTACT TCGATGCGGT GCTGCTGGAC CAGGACATGC CCGGCATGAC CGGCATGCAA CTGGCGGCCA AGATCAAGGA AGACCCCAGC CTCAACCACG ACATCCTGAT CATCATGCTC ACCGGCATCA GCAACGCGCC GAGCAAGGTG ATCGCACGCA ACGCCGGGAT CAAGCGCATC CTGGCCAAAC CGGTGGCCGG CTACACGCTC AAGACCACCC TGGCCGACGA GCTGGCCCAG CGCCCCAACG ACAGTCCTGC GCAGGCCGCA CCGACGCCGG TGAGCACGCC GCTGAACGTG CCGGCCGACT TCCGCATTCT GGTGGCCGAG GACAACAGCA TCTCCACCAA GGTCATCCGC GGCATGCTCG GCAAGCTCAA TCTCAAGCCG GATACCGCCA GCAACGGCGA GGAAGCCCTC AGCGCGATGA AGGCACAACC TTACGATCTG GTGCTGATGG ACTGCGAGAT GCCGGTGCTC GACGGCTTCT CCGCCACCGA ACAGCTGCGC GCCTGGGAAA AGAGCGAGAA GCGCCCGCGC ACGCCGGTGG TGGCACTGAC CGCGCATATC CTCAGCGAAC ACAAGGAACG CGCGCGCGCC GTGGGCATGG ACGGACACAT GTCCAAGCCG GTGGAACTGT CGCAACTGCG CGAGCTGATC GAGCACTGGA TCGCCGAACG CGAACTGCGT CGCCAGCGCG ATGCGCTGCC ACACTGA
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Protein sequence | MRRLRIAIGL LASLLLLGLS LTASAAPSST GTQSWSYLVD ASARLGLEEI RAQRQQFKPL SKQSFTFPPS QHAVWLRVEL APQQQPAWLW VFSPRVQYLD YYLLRDGQLE QNLHTGEAMP LDSRPLPSRF YLMPLPNDGQ ARVAYVRLTS NHPLMTWFKV MDQAELVSLE KPAYLYGMLF GALLLLTLYN LIRFFYSRSA TGLWLAGVNI GLAVCSSANL GIFAQWLPSL GYNQSLIADL SALFAAFSAL AFGLSFFHGT TVQHSPLNRL LQGNALLLLV YALCIALTGL FWFSSLVYLL VALSSLNLLL VGSLHWRAGY QPARLIAVGM LVFNLGFGFF VPVLLGFDQL NPGWLVLGVF SVATLAGLIL SVSLTERQRQ ITSDTLDSRT ALAASSAELR AKAEFLAKIS HEIRTPMNGV LGMTELLLGT PLSAKQRDYV QTIHSSGNEL LTLINEILDI SKLESGQIEL DDVQFDLGAL IEDCLDIFRA KAEQQKVELI SFIQPQVPRV ISGDPTRLRQ ALLSLLDNAF KQTDEGEILL VAALDSSDGK HRLRIAVQDS GRPLLPEERD ALLNAELQSR DFLSATRLGG RLGLIIARQL VRLMGGEFGI QGSSNQGTTL WLALPLDPAR LEQPETDLDS PLQGARLLVV DDNDTCRKVL VQQCNAWGLQ VSAVPSGKEA LALLRTKAHM REYFDAVLLD QDMPGMTGMQ LAAKIKEDPS LNHDILIIML TGISNAPSKV IARNAGIKRI LAKPVAGYTL KTTLADELAQ RPNDSPAQAA PTPVSTPLNV PADFRILVAE DNSISTKVIR GMLGKLNLKP DTASNGEEAL SAMKAQPYDL VLMDCEMPVL DGFSATEQLR AWEKSEKRPR TPVVALTAHI LSEHKERARA VGMDGHMSKP VELSQLRELI EHWIAERELR RQRDALPH
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