Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0600 |
Symbol | |
ID | 5109562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 660813 |
End bp | 661538 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501811 |
Product | hypothetical protein |
Protein accession | YP_001186100 |
Protein GI | 146305635 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACTG TAGTACGCCC TCTGGCCCTG CTTCTGACCA CTCTGCTCGT TCTGAGCGGT TGCAGCCTGC TGCAGCAGAA GCCGGTGCCG CTCTATCAGC TCGACAGCGG CGACGCCGTC ACCCCGACCA AGGACACGGG TATGGCGGTA CTGGTGGGCC CGATCAGCGT GGCCGACTAC CTGCGCCAGC AGCACCTGCT GCAGCGTCAG CCCGATGGCA GCCTGGTGGC AGCGCCGGAA GCGCGCTGGG CCAGCGGTCT GGCCAACGAT ATCGATCAGC AGATGCTGCG CCAGCTGGCC TGGCGCCTGG AAAGCCAGCG CCTGGCCCTG GCCCCTGCCG CTCCCGGCTT CAACGCCGAT GCGCAGGTGA TGCTGACCAT CACCCGCCTG GACTCCGGCC CTACCCAGCC CGCCATTCTG GAAGCCCAGT GGCGCCTGCT CGATCGCAAC GGCCAACTGC GTGACAGCCG TCTGATCCGC ATGGAAGAGG CCCATGGCGG CCCGCTGGCC GAGCAGGTCA AGGCCCAGAG CGCGCTGCTG CAGCGCCTGG CTGCAGAGCT GGCAGTGGCC ATCCAGCCCA TCGCCGTGGT CGAAGAGCCT GTACCCGAGC CGCCCCGCAA GAAGCCGCCA GTGGCCAAGG CCAAACCCCA GGAGCCGCCC GCCGCGGGGC CGAGGATTCC GGTGGCAGAA CCCATCAAGA TCGATACGGA AGTCTTCCGT TTCTAG
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Protein sequence | MMTVVRPLAL LLTTLLVLSG CSLLQQKPVP LYQLDSGDAV TPTKDTGMAV LVGPISVADY LRQQHLLQRQ PDGSLVAAPE ARWASGLAND IDQQMLRQLA WRLESQRLAL APAAPGFNAD AQVMLTITRL DSGPTQPAIL EAQWRLLDRN GQLRDSRLIR MEEAHGGPLA EQVKAQSALL QRLAAELAVA IQPIAVVEEP VPEPPRKKPP VAKAKPQEPP AAGPRIPVAE PIKIDTEVFR F
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