Gene Pmen_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0600 
Symbol 
ID5109562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp660813 
End bp661538 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID640501811 
Producthypothetical protein 
Protein accessionYP_001186100 
Protein GI146305635 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTG TAGTACGCCC TCTGGCCCTG CTTCTGACCA CTCTGCTCGT TCTGAGCGGT 
TGCAGCCTGC TGCAGCAGAA GCCGGTGCCG CTCTATCAGC TCGACAGCGG CGACGCCGTC
ACCCCGACCA AGGACACGGG TATGGCGGTA CTGGTGGGCC CGATCAGCGT GGCCGACTAC
CTGCGCCAGC AGCACCTGCT GCAGCGTCAG CCCGATGGCA GCCTGGTGGC AGCGCCGGAA
GCGCGCTGGG CCAGCGGTCT GGCCAACGAT ATCGATCAGC AGATGCTGCG CCAGCTGGCC
TGGCGCCTGG AAAGCCAGCG CCTGGCCCTG GCCCCTGCCG CTCCCGGCTT CAACGCCGAT
GCGCAGGTGA TGCTGACCAT CACCCGCCTG GACTCCGGCC CTACCCAGCC CGCCATTCTG
GAAGCCCAGT GGCGCCTGCT CGATCGCAAC GGCCAACTGC GTGACAGCCG TCTGATCCGC
ATGGAAGAGG CCCATGGCGG CCCGCTGGCC GAGCAGGTCA AGGCCCAGAG CGCGCTGCTG
CAGCGCCTGG CTGCAGAGCT GGCAGTGGCC ATCCAGCCCA TCGCCGTGGT CGAAGAGCCT
GTACCCGAGC CGCCCCGCAA GAAGCCGCCA GTGGCCAAGG CCAAACCCCA GGAGCCGCCC
GCCGCGGGGC CGAGGATTCC GGTGGCAGAA CCCATCAAGA TCGATACGGA AGTCTTCCGT
TTCTAG
 
Protein sequence
MMTVVRPLAL LLTTLLVLSG CSLLQQKPVP LYQLDSGDAV TPTKDTGMAV LVGPISVADY 
LRQQHLLQRQ PDGSLVAAPE ARWASGLAND IDQQMLRQLA WRLESQRLAL APAAPGFNAD
AQVMLTITRL DSGPTQPAIL EAQWRLLDRN GQLRDSRLIR MEEAHGGPLA EQVKAQSALL
QRLAAELAVA IQPIAVVEEP VPEPPRKKPP VAKAKPQEPP AAGPRIPVAE PIKIDTEVFR
F