Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0370 |
Symbol | |
ID | 5108292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 384493 |
End bp | 385092 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640501586 |
Product | hypothetical protein |
Protein accession | YP_001185875 |
Protein GI | 146305410 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGTC TCACCCTGTT GCTGGCCGCC ACCCTGCTCG GCGCCTGCTC GATCCTGCCG CAGAGCGAGC CGCTGGACAT CTACCTGCTG CCGGCGGCGC AACTGCCGGC GCAGAGCCAA CGGGTCGACT GGGCGCTGCG GATCAACAGC CCCAGCAGCA GTCAGCTGCT CGACGGCACA CGCATCGTCG TGCTGCCCGA GCCCGACCGG GTCAACACCT ACCAGGGCGT GCGCTGGAGC GAGCGCACGC CGCAGCTGCT GCGCAACCGC CTGCTCGATG CCTTCCAGGA CGACGGCCGG ATTCAGGCCC TGAGCAACGA GGAGCAGCGC CTGCAGGCCG ATCTGGAACT GGTCAGCGAC CTGCGCAGCT TCCATAGCGA ATATCGCGAC GGCATCCCGT ACGCGCTGAT CCGTCTCGAG GTCAACCTGG TGGATGCGCG CGATCAACGC ATCCTCGCCA GCCGCCGCTT CAGCATCAGC CAGCAGGCGA GCGATACCTC GGTGCCGGCG GTGATCGCCG CCTTTGGCCA GGCGGGGGAT CAATTGTCCC GCGAGCTGGT GGACTGGACG CTGAACCAAG GGCGGCGCGC TACCCAGTAG
|
Protein sequence | MKRLTLLLAA TLLGACSILP QSEPLDIYLL PAAQLPAQSQ RVDWALRINS PSSSQLLDGT RIVVLPEPDR VNTYQGVRWS ERTPQLLRNR LLDAFQDDGR IQALSNEEQR LQADLELVSD LRSFHSEYRD GIPYALIRLE VNLVDARDQR ILASRRFSIS QQASDTSVPA VIAAFGQAGD QLSRELVDWT LNQGRRATQ
|
| |