| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0214 |
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| Symbol | |
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| ID | 5106181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 215822 |
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| End bp | 216946 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501430 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001185720 |
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| Protein GI | 146305255 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG TTTCCCTCGC CCAACACATG AACAGCCACC GCGGCGCCGC CGATGGCATC
GGCAACGCCC GCGAGCAGCA GCTGCAGGCC GCCGCCGAGC AGTTCGAGGC GCTGTTTTTG
CAGCAGATCC TCAAGCAGAT GCGCAAGGCC AGCGACGTGC TCGCCGCCGG CAACCCGATG
CGCAGCCGCG AGTTGGACAC CATGCGCGAC TTCTATGACG AGGTGCTGGC CGAGACCCTG
GCCGGGCGCA AGCAGACCGG CATCGCCGAC ATGCTGGTCA AGCAGCTGTC CGGTGGTGGG
GATAGCGCAC CTGACCTGGA AGCGGCCGCC GCTGCCGCCC GTTCGGCGGA ACTGCCGCAG
CGCTCTTCCA GCAGCCTGCT GGAGCCGCTG CGCAGCACCT GGCAACGTGG CGTGGACAGC
CTCGGCCAGG TCTGGGACAA GGGTTCGGCG GGCTTTCTCG CCCTGGTCGA ACGGGTCATC
CAGCAGGAGT CGGCCGGCCG CGTCGATGCC GTGTCGCCCA AGGGCGCGCG CGGCCTGATG
CAGCTGATGC CGGACACCGC ACGGGAGATG GCCGCCGAAC TCGGCCTGCC GTTCAGCGAA
GCCCGCCTGA CCAGCGATGC CGACTACAAC AGGCGCCTCG GCAGCGCCTA CCTGGACAAG
ATGCTGCAGC GCTACGACGG GCACCAGGCC CTGGCGCTGG CGGCTTATAA CGCCGGCCCC
GGCCGCGTCG ACGAATGGCT CAAGGTGCAC GGCGACCCGC GCCGCGGCGA GATCGCCACC
GGCGCCTGGA TCGAGCGTAT TCCCTTCCAG CAAACCCGCG ACTACACGCG CAAGATTCTC
GGCGACCTGG CCAAGGCCGA GCAGCCGCCC AAGGATGATG CACAAGTCAG CAGCCCGCTC
AGCGCACAGA CCCGCCAGCA GCTGGCCAGC GCCCTGAGCG CCGACAGCGG CCTGCTGCTC
GGCGCCGTCG CCGGCAAGCA GGCGCTGGTG CGCGGCGAAT TTAAGTCCGC CGCCGATTCC
GTCGCCCTGT CCTCAGTAAC AGCCCAATCC GCTGCCGACG ACGCCCGTGC GCCGCGTCTG
GCGGCCTTCG CTCAGCCGGT GCGCTTCGAG CGTCAGGAGT CCTAA
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| Protein sequence | MSIVSLAQHM NSHRGAADGI GNAREQQLQA AAEQFEALFL QQILKQMRKA SDVLAAGNPM
RSRELDTMRD FYDEVLAETL AGRKQTGIAD MLVKQLSGGG DSAPDLEAAA AAARSAELPQ
RSSSSLLEPL RSTWQRGVDS LGQVWDKGSA GFLALVERVI QQESAGRVDA VSPKGARGLM
QLMPDTAREM AAELGLPFSE ARLTSDADYN RRLGSAYLDK MLQRYDGHQA LALAAYNAGP
GRVDEWLKVH GDPRRGEIAT GAWIERIPFQ QTRDYTRKIL GDLAKAEQPP KDDAQVSSPL
SAQTRQQLAS ALSADSGLLL GAVAGKQALV RGEFKSAADS VALSSVTAQS AADDARAPRL
AAFAQPVRFE RQES
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