Gene Pmen_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0158 
Symbol 
ID5106838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp157755 
End bp158405 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID640501374 
ProductDSBA oxidoreductase 
Protein accessionYP_001185664 
Protein GI146305199 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.699641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTA CCAAGGAGTA CCCCATGCGT AACCTGATTC TCGGCGCCGC TCTGGCCATC 
AGCAGCCTGT TCGGGATCAC CGCTCATGCC GAGCCGGTGG CTGGCCAGCA GTACGTCGAG
CTGAAGAGCC CGGTGCCGGT GTCCAAGCCT GGCAAGGTCG AGGTGGTGGA GCTGTTCTGG
TATGGCTGCC CGCATTGCTA CCAGTTCGAA GCGACCCTCA ACCCCTGGGT CGAGAAGCTG
CCGGACGACG TCAACTTCGT GCGCATCCCC GCCCTGTTCG GCGGTATCTG GAACGTCCAC
GGCCAGGCGT TCATCACCCT GGAAATGATG AAGGTCGAGC ACAAGGTGCA TGACGCCGTG
TTCACCGCCA TCCATCAGGA GAAGAAGAAG CTGGGCTCCG CCGAGGAATT CGCCGACTTC
GTCGCCACCC AGGGTGTCGA TCGCGACGCC TTCCTCAAGA CCTTCAACTC CTTCGCCGTC
AAAGGCCAGA TGGAAAAGGC CAAGAAGCTG GCCATGGCCT ACCAGATCAC CGGTGTGCCG
GTGATGATCG TCGGCGGCAA GTACCGCTTC GACCTGGGCT CGGCCGGTGG CCCGCAGCAG
ACCCTCGAGG TCGCCGACCA CCTGATCGCA AAGGAGCGCG CCGCGCTTTA A
 
Protein sequence
MPTTKEYPMR NLILGAALAI SSLFGITAHA EPVAGQQYVE LKSPVPVSKP GKVEVVELFW 
YGCPHCYQFE ATLNPWVEKL PDDVNFVRIP ALFGGIWNVH GQAFITLEMM KVEHKVHDAV
FTAIHQEKKK LGSAEEFADF VATQGVDRDA FLKTFNSFAV KGQMEKAKKL AMAYQITGVP
VMIVGGKYRF DLGSAGGPQQ TLEVADHLIA KERAAL