| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0120 |
|---|
| Symbol | |
|---|
| ID | 5106305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 119556 |
|---|
| End bp | 120578 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640501336 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001185626 |
|---|
| Protein GI | 146305161 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.232442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGA CCATGAAAGC CGCAGTGGTC CACGCCTTCG GCCAGCCGCT GCGTATCGAG
GAGGTGAAAA CCCCGCTACC CGGCCCGGGG CAGATTCTGG TGAAGATCGA GGCTTCCGGC
GTCTGCCACA CCGACCTGCA CGCAGCCGAG GGCGACTGGC CGGTGAAGCC GAGCCTGCCG
TTCATTCCCG GCCATGAAGG GGTTGGCTAC GTGGCGGCGG TCGGCAGCGG CGTGACCCGG
GTCAAGGAGG GCGACCGTGT CGGCGTGCCC TGGCTGTACA GCGCCTGTGG CTGCTGCGAG
CACTGCCTGA CCGGCTGGGA GACGCTTTGC GAGAGCCAGC AGAACACCGG CTACTCGATC
AACGGCGGCT ATGCCGAGTA CGTGCTGGCT GACCCCAACT ACGTCGGCAT CCTGCCGAAG
AACGTCGACT TCCTCGAGAT CGCGCCGATC CTCTGTGCCG GGGTGACGGT GTACAAGGGC
CTCAAGGAAA CCAGGGCGCG GCCCGGCCAG TGGGTGGTCA TCTCCGGTAT CGGCGGCCTC
GGTCACGTCG CCGTGCAGTA CGCCCGCGCC ATGGGCTTGC ACGTGGTCGC GGTGGATGTC
GACGACGCCA AGCTGGAGCT GGCGCGCAGG CTCGGCGCCA GCCTGACCAT CAACGCACGC
CAGGAAAACC CGGCCGAGGT GGTGCAACGC GAGATCGGCG GCGCCCACGG TGTGCTGGTT
ACCGCGGTGT CCAACGCCGC CTTCGGCCAG GCCATCGGCA TGGCGCGTCG GCACGGTACG
GTGGCCCTGG TCGGCCTGCC GCCGGGCGAC TTCCCCACGC CGATCTTCGA TGTGGTGCTC
AAGGCCATCA GCATCACCGG CTCCATCGTC GGCACCCGCG CCGATCTGCA GGAGGCGCTG
GACTTCGCCG GCGAAGGCCT GGTCAGGGCC ACGGTGCACA GCGACAGGCT GGACAACATC
AATGCCATCT TCGAGCAGAT GCGCCAGGGG CAGATCGAGG GACGCATGGT GCTGCAGTTC
TAG
|
|---|
| Protein sequence | MNPTMKAAVV HAFGQPLRIE EVKTPLPGPG QILVKIEASG VCHTDLHAAE GDWPVKPSLP
FIPGHEGVGY VAAVGSGVTR VKEGDRVGVP WLYSACGCCE HCLTGWETLC ESQQNTGYSI
NGGYAEYVLA DPNYVGILPK NVDFLEIAPI LCAGVTVYKG LKETRARPGQ WVVISGIGGL
GHVAVQYARA MGLHVVAVDV DDAKLELARR LGASLTINAR QENPAEVVQR EIGGAHGVLV
TAVSNAAFGQ AIGMARRHGT VALVGLPPGD FPTPIFDVVL KAISITGSIV GTRADLQEAL
DFAGEGLVRA TVHSDRLDNI NAIFEQMRQG QIEGRMVLQF
|
|---|
| |