| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3671 |
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| Symbol | |
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| ID | 5079004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4275667 |
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| End bp | 4277784 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500877 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001185178 |
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| Protein GI | 146294754 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGAT TTGGTAAGTT TTACCCACAA TCAAAGTGGG TTATCGGTTC TCTTGCGCTG
GGGCTTAGCG CTATTTCAGG CTCAACTATT GCTGATAGTG GAACTGCTCC GGATAAGCAA
TCCAAGCAAC AAGATGCAGC GGGAAATATT GAAGTCATCA CAGTTTACGG TCAGAAAATC
GAGCGCACGC TGAAGGAAAC GGCGAGCTCA GTGACAGTGA TCACTGAAGA ACAGTTGAGG
AAAAATGCGG ACCAATCAAC GATTTCTGAA ATTCTCGGCG GTACGCCAAA CTTAATTTAT
GCCGGAAATA CCGATGCGCC CATTATCCGC GGTACGGATA CCAAAGGGCC TGTTGCAGCG
GGTAATGCCT ATTTATCTAA GCCTGTACCC GGGGCAACTA TCAGTGTTGA TGGTAAATAT
CTGAGCCCCG CAGAACTGGA TTTAGGCGCC GCAGGCGTGT GGGATGTGTC GTCTATTGAA
GTCTACCGTG GTCCGCAAAC GACCAGTCAA GGAGCCAACA GTATTGCTGG CGCTGTAGTG
ATCCATACCC ATAACCCCAC TTATACGCCA GAATTTGCAG CGCAAGCACT TTATGGCAGT
CGAAATAAGC AGCGCTTTTC GGTCATGGCG TCCGGTGCGC TCAGTAATGA CTTTGCCGCA
AGAATTAGCG CAGATTACAG CGCTAGAGAT ACTTTTGTTG ATTACGTTAA TCCAGAATTT
ACTGCCCATG ATTTGGATTT TGAGTTTAAA AACCAAAATC TACGGGCGAA GTTGCTATGG
GAACCCGAAA AATACAGCAA CTTTTCCGCC ATGCTGACTT ATTCCTCCAC TGAGGCTAAA
CGTCCCAGAA ATGAGGTGGT ATCAGAACCC TATGATGACT TAGAAAATCG TTCAATTTTT
CAGGATAATC AGGAAGTCAG CAATCATGTC GGGATTTTTG ATCTTGAATA TGTGTTTGAC
AATGGGATGA AGCTGCATAA CCAACTGCAG TATTCAGAAG GCCAGTTTGA TTATCGATTT
GCAGCACCTT ATCAAGGGAT TGCAAAACGA GATAATGAAA ACTTTTCGAA TGATATAAGG
CTGAACTTTG GTGACAAAAG TTCAGAGTTT AGTGGGGTTG CCGGTGTCTT CTACTGGGAT
GATAAAACCA ACAACAAGCT GAACAACGTA TTTGGTAATG CCGACGCCGA CCTGAGACAT
ACCAGTTTTG CCCCCTACGG TGAAGTCATA TGGCGCTTCT CACCTAAGTG GGCATTCACC
AGCGCACTCC GTTATCAGTC TGATGAAATT AGCCACGATG GTATTGCCAG CTACATCCCA
AACGTGCGCC ATCAATATGA AGAGACGTTT ACGGCTTTAT TACCTAAGGT TGCCCTGTCC
TATGATCTGA CAGATAACGT CTTGGTCGGC GCTATGATCA GTGAAGGTAA CATTCCTGGG
GGCACAGGTA TTAACTTCCG CGGCGGCGAA TATTATACCT TTGATGCCGA ATCGGCATGG
AACTATGAAC TTTTTACCCG TATCGAGCTG CTTGAACAGC GCTTAATCAT AAATAGCAAT
CTCTTTTACA CCCGCTTTAA GGATTCACAA CGTTCTGTTA CTGACTACCT AGATGGACGA
CCCTTTGGTT CTGTCATTAT TAATGCCGAT GAAGCGCAAA GCTATGGGAT TGAATTAGAT
TGGAACTTTA AAGTGGCCGA TAGTTTTAGC TTATATGGTG GGCTGGGTTT ACTTGAAACT
GAGATAAGTG AATTTAATGA CTACCGTGGC GAGGAGTTTG TCGGCAACGA ATTTAGTAAA
GCGCCGGGAT ATATGTTCAA TATAGGGTTT GACTATTCAA TCACAGACAC TATCAAAGTG
AGCGGTGATG TGCGCCATAC GGATGGATAT TTTTCAACGG ATACCAATGA GCCTGAGTTA
AGAGTGGGAT CTTACACTAC GGTAAACCTG AATTCTTCCT ATCAAATCAA CCAATATTTT
GAAGCCTTTG TTTATGCTCG CAATTTGCTG GATGAACGTG CACCTGTGGC AAAAATGGCT
GACAGAAGTA CCGGAGGCGT GGATGCATAT TTACTTGAAC CTCGAGAAAT AGGTGTAGGC
GTTAGGGCGA AGTTTTAG
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| Protein sequence | MPRFGKFYPQ SKWVIGSLAL GLSAISGSTI ADSGTAPDKQ SKQQDAAGNI EVITVYGQKI
ERTLKETASS VTVITEEQLR KNADQSTISE ILGGTPNLIY AGNTDAPIIR GTDTKGPVAA
GNAYLSKPVP GATISVDGKY LSPAELDLGA AGVWDVSSIE VYRGPQTTSQ GANSIAGAVV
IHTHNPTYTP EFAAQALYGS RNKQRFSVMA SGALSNDFAA RISADYSARD TFVDYVNPEF
TAHDLDFEFK NQNLRAKLLW EPEKYSNFSA MLTYSSTEAK RPRNEVVSEP YDDLENRSIF
QDNQEVSNHV GIFDLEYVFD NGMKLHNQLQ YSEGQFDYRF AAPYQGIAKR DNENFSNDIR
LNFGDKSSEF SGVAGVFYWD DKTNNKLNNV FGNADADLRH TSFAPYGEVI WRFSPKWAFT
SALRYQSDEI SHDGIASYIP NVRHQYEETF TALLPKVALS YDLTDNVLVG AMISEGNIPG
GTGINFRGGE YYTFDAESAW NYELFTRIEL LEQRLIINSN LFYTRFKDSQ RSVTDYLDGR
PFGSVIINAD EAQSYGIELD WNFKVADSFS LYGGLGLLET EISEFNDYRG EEFVGNEFSK
APGYMFNIGF DYSITDTIKV SGDVRHTDGY FSTDTNEPEL RVGSYTTVNL NSSYQINQYF
EAFVYARNLL DERAPVAKMA DRSTGGVDAY LLEPREIGVG VRAKF
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