Gene Rsph17025_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3038 
Symbol 
ID5084377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3106697 
End bp3107416 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID640484609 
Productantenna complex, alpha/beta subunit 
Protein accessionYP_001169227 
Protein GI146279068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.631702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACT CGAAGATGTG GCTGACGGTC AATCCGAACC TCGGCATTCC GCTGCTGCTG 
GGTTCCGTGG CTCTCGGTTC GGTGGCCGTC CATGCGGCCG TCCTGACCAC GACCCCGTGG
ATCGCCGACT ACTACCAGGG CTCGGCACCG CGCGCTGTCG TGGCGGTTCC GGCGGAAGAG
GCCGTCGCTG TCGAGGAAGT GGCCGCGGTC GAGGAAGCCG CTCCGGCAGC CGAGGAAGTG
GCTCCGGTCG AGGAAGCGGC TGTCGAGGAG GCCGCTCCGG TCGAGGAAGC CGCCGCTCCG
GCCGAAGAGG CTGCTCCGGT CGAGGAAGCC GCCGCTCCGG CCGAAGAGGC CGCTCCGGTT
GAGGAAGCCG CCGCTCCGGC GGAAGAGGCT GCTCCGGTTG AGGAAGCCGC CGCTCCGGCC
GAAGAAGCTG CTCCGGTCGA GGAAGCTGTC GTGGCGGAAG AGGCGGCTCC TGCCGCCGAG
CCGGTTGCCG AAGCCGCGGC CGCCGAGGAA GCTGCTCCGG TGGCGGAAGT GGCCGCCGCT
CCGGCAGCCA TGTCGCTGGT GGACATCGCC GCCAAGCTGA ACGCGCTGGG CTACTCGGTC
GAGTCGGTCT CGAAGACCGA AGGCGGCTAT GTCGTCAACA TGACCGACGC CAACGGCATG
CCGGTTGCGG CGACCCTGGA CCCGGTCACC GGGCTGCCGG TCGTGCCGGT CGCGCAGTAA
 
Protein sequence
MNNSKMWLTV NPNLGIPLLL GSVALGSVAV HAAVLTTTPW IADYYQGSAP RAVVAVPAEE 
AVAVEEVAAV EEAAPAAEEV APVEEAAVEE AAPVEEAAAP AEEAAPVEEA AAPAEEAAPV
EEAAAPAEEA APVEEAAAPA EEAAPVEEAV VAEEAAPAAE PVAEAAAAEE AAPVAEVAAA
PAAMSLVDIA AKLNALGYSV ESVSKTEGGY VVNMTDANGM PVAATLDPVT GLPVVPVAQ