| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2843 |
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| Symbol | |
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| ID | 5084221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2897612 |
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| End bp | 2899219 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640484413 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001169034 |
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| Protein GI | 146278875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.430895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAT CGCACCACCT GATGATGGAC GATCTGGTCA CGCGACTGCG ACGCGGACAG
CTGTCGCGCC GCGAGTTTCT GGCCCGCAGT TCGGCGCTGC TGGCGGCCGG GGCCGTGGTC
GGCCTGCCGG GTGGATTGCG CGCGCAGGAG GCCGCGCCCA AGGCCGGGGG CTTCATGCGT
CTGGGTCTGC ACAATGCCTC TCAGAACGAC AATCTCGACC CCGGAAGCTG GTCGACGAGC
TGGACCGGCG CCTCGTTCAA CGGCGGTGTC TATAACAACC TTGTCGAGAT CCTGCCCGAC
GGCTCGGTCG CGGGCGATCT CGCCGAGAGC TGGGACGCCG AGCCCGGGGC AAAGGTCTGG
CGCTTCAAGC TGCGGTCGGG CGTGACCTTC CACAACGGCA AGAGCCTCGA CGCCGAAGAT
GTGCGCCAGT CGCTCGAACA CCACATGAAG CCGGACTCGA CCTCCGGGGC GCGCGCCATC
GTCGAGCAGA TCGAGACGAT CGAGGTGGAG GGATCGGATA CGGTCCGCAT CACCCTCTCG
GAGGGCAATG CCGATCTGCC CTATCTGCTG TCCGACTATC ACCTGTCGAT CTATCCCGCG
CTCGACGGCG GCGGGATCGA CATGGAGAGC GCCAACGGCA CCGGGGCCTT CACCCTCGAG
AGCTTCGAGC CGGGCATCGC CACCCGCCTC AAGCGCAACC CGAACTATCA CAAGAACAAC
AAGCCCTATC TCGACGAGGT GGAGTTCATC AACATCACCG ACGCCACGGC CCGGCTGAAC
GCGCTGCTGA CGGGCGAGGT CGATTTCATC CAGGATCTCG ACATCCGCAA CGTGGCGATG
GTCGAGCGCA GCGGCGATTT CTCGGTGCAG CGCATCCCGA GCCTGCGCCA TTTCACCTTC
GACATGGACA CGCGCGTTGC GCCCTTCGAC AATCCCGACG TGCGGCTGGC GCTGAAACAT
GCGCTCGACC GGGACGATGT GATCGAGAAG GTGTTCCTGG GCGAGGCCAC GAAGGGCAAC
GACAACCCGG TCGCTTCGAT CCAGAAGTTC CACCACGAAC TGCCCGCGCG CGACTACAGC
GTCGAAAAGG CCAGGGAGCA TCTGGCGAAG GCCGGGCTCG ATCAGGTCAG CGTTGATCTG
TCGGTCGCCG AGAATGCCTT TGCCGGCGCC ATCGAGGCGG CGACGCTCTA CCAGCGGCAT
GCGGCCGAGG CCGGCATCAC GATCAATATC GTCCAGGAGG CGGCCGACGG CTACTGGGAG
AATGTCTGGC GCAAGAAGCC CTTCTGCGCC GTCGATTACT TCGGCCGCGC CACGGTCGAC
TGGCTCTTCT CGACGAGCTA TGTCACCGGA GCGCCGTGGA ACTCGGGCTG GTCGAACGCG
CGGTTCGACG AGCTGCACCA GATGGCCCGC GCCGAGACCG ACGAGGCCAA GCGCATGGCC
TGCTACGCCG AGATGCAGGA GATCCTGCGC GACGATGGCA ATGTCATCAC GGTGGCCTTC
GTGAGCTGGC GCAATGCCGT CTCGAACCGC ATCGGCTTTG GCGAAGTCGG CGGGCTGATG
CCGCTCGACA ACATGCGGAT GTGCGAGCGG TGGTGGGTCA AGGACTGA
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| Protein sequence | MNKSHHLMMD DLVTRLRRGQ LSRREFLARS SALLAAGAVV GLPGGLRAQE AAPKAGGFMR
LGLHNASQND NLDPGSWSTS WTGASFNGGV YNNLVEILPD GSVAGDLAES WDAEPGAKVW
RFKLRSGVTF HNGKSLDAED VRQSLEHHMK PDSTSGARAI VEQIETIEVE GSDTVRITLS
EGNADLPYLL SDYHLSIYPA LDGGGIDMES ANGTGAFTLE SFEPGIATRL KRNPNYHKNN
KPYLDEVEFI NITDATARLN ALLTGEVDFI QDLDIRNVAM VERSGDFSVQ RIPSLRHFTF
DMDTRVAPFD NPDVRLALKH ALDRDDVIEK VFLGEATKGN DNPVASIQKF HHELPARDYS
VEKAREHLAK AGLDQVSVDL SVAENAFAGA IEAATLYQRH AAEAGITINI VQEAADGYWE
NVWRKKPFCA VDYFGRATVD WLFSTSYVTG APWNSGWSNA RFDELHQMAR AETDEAKRMA
CYAEMQEILR DDGNVITVAF VSWRNAVSNR IGFGEVGGLM PLDNMRMCER WWVKD
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