Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0977 |
Symbol | |
ID | 5083193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 1001465 |
End bp | 1002823 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640482534 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001167183 |
Protein GI | 146277024 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.606099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACA TCGCCCTCCT CCAGAGTCTC GGACTCTTTG ATGCGCGCGT GCCGCGCTAC ACGAGCTACC CGGCGGCGCC CGTCTTTTCC GGTGCCGTCG GTGCGGACTT TCAGGCACAG GCGATCGAGG CGCTCGATCC CGCCGTGCCG ATCTCCGTCT ATATCCATGT GCCCTTCTGC GAGCGGCTCT GCTGGTTCTG CGCCTGCCGC ACCCAAGGCA CGCAGACGCT GGCCCCGGTC GAGGCCTATG TCGGCACCCT CCTGCAAGAG CTGGAACTGG TGAAGAAGCA CCTTCCGGCG GGCGTGAAGG CGGGGCGGCT GCACTGGGGC GGCGGCACGC CCACGATTCT CTCGCCCGAG CTGATCCACA AGCTCGCGCA GGCGATCAAG GCTGTCATCC CCTTCGCCGA GGATTACGAG TTCTCGGTCG AGATCGACCC GATGATGGTG GACGAGCCGA AGATCCGCGC CCTGAGCGAG GAGGGCATGA ACCGCGCCTC GATCGGCATC CAGGACTTCA CCGACATCGT CCAGAGCGCC ATCGGCCGCG AGCAGCCCTT CGAGAACACC CGGGCCTGCG TCGAGACGCT GCGCCGCTAC GGGGTCCATT CGCTGAACAC CGATCTCGTC TATGGCCTGC CGCACCAGAA CCGCGAAAGC CTTGCGGCCA CGATCGACAA GGTGCTGCAA CTCGGGCCCG ACCGCGTGGC GATCTTCGGC TATGCGCATG TGCCGTGGAT GGCCAAGCGG CAGAAGCTGA TCGACGAGAA CGTGCTGCCC AACGACATGG AGCGGCACGA GCTGGCCAAT CTCGCGGCGA AGATGTTCAC CGAGGGCGGA TTCGAGCGGA TCGGCATCGA CCACTTCGCC CGGCCCGACG ACAGCATGGC CGTCGCCGCA CGCAGCGGCA AGCTGCGCCG CAACTTCCAG GGCTACACGG ACGACACCTG CCCGACGCTG CTGGGCATCG GCGCCTCGTC GATCTCGAAG TTCGAGCAGG GCTACCTGCA GAACACCGCC GCCACGGCCG CCTATATCAA GGCGATCGAG GAAGGGCGTC TGCCCGGCTA TCGCGGCCAC CGCATGACCG ATGAGGACTA CCTCCACGGC CGCGCGATCG AGATGATCAT GTGCGAGTTC CGGCTGGATC TGCCGGCCCT GCGGGCGCGC TTCGGCGAGG CCGCGGAGAC CATGGTGCCC CGCATTACCG AGGCTGCGGC CAAGTTCGCG CCCTTCATCA CGGTGGACGA GGCGGGCTCC ATGTCGATCG AGGCAGAGGG CCGGGCGCTG ACGCGGATGA TCGCGCGTGT GTTCGATGCC TATGAGACGC CCGAGGCGCG TTACTCGCAG GCCTCGTGA
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Protein sequence | MTNIALLQSL GLFDARVPRY TSYPAAPVFS GAVGADFQAQ AIEALDPAVP ISVYIHVPFC ERLCWFCACR TQGTQTLAPV EAYVGTLLQE LELVKKHLPA GVKAGRLHWG GGTPTILSPE LIHKLAQAIK AVIPFAEDYE FSVEIDPMMV DEPKIRALSE EGMNRASIGI QDFTDIVQSA IGREQPFENT RACVETLRRY GVHSLNTDLV YGLPHQNRES LAATIDKVLQ LGPDRVAIFG YAHVPWMAKR QKLIDENVLP NDMERHELAN LAAKMFTEGG FERIGIDHFA RPDDSMAVAA RSGKLRRNFQ GYTDDTCPTL LGIGASSISK FEQGYLQNTA ATAAYIKAIE EGRLPGYRGH RMTDEDYLHG RAIEMIMCEF RLDLPALRAR FGEAAETMVP RITEAAAKFA PFITVDEAGS MSIEAEGRAL TRMIARVFDA YETPEARYSQ AS
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