Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0560 |
Symbol | |
ID | 5082865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 560158 |
End bp | 560628 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482115 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001166771 |
Protein GI | 146276612 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGGCGG GTGTCATCAA GAAGTCCGGC GGAGGACGCC GCGGGCGGCG TCGCGGCCAG TCGGCCGCCA TGTCCGAGAT CAACGTCACG CCCTTCGTGG ATGTGATGCT CGTGCTGCTC ATCATCTTCA TGGTGGCGGC CCCGCTTCTG ACGGTGGGCG TGCCGGTGAA GCTGCCCGAG ACCGCGGCCA ATGCCCTGCC GACCGAGCAG GAAGAGCCCC TCACGATCAC GATCGCCGCC GACGGGCGGC TGACGATCCA GACCACCGAG ACGCCCGAGG CCGAGCTGAT CCCCAAGCTC TCGGCCATCG CGGCCGAGCG GACCTCGAAG AAGGTCTTCC TGCGCGCCGA CGGCGCGATC CCCTACGAGC GCGTGGCGCA GGTGATGGGG GCGCTCAACC GGGGCGGTTT CCAGGACATC GGTCTGGTGA CGGATGTCGG CGGCCCGACG TTCGGCGGAA GCGGCGGCTA G
|
Protein sequence | MGAGVIKKSG GGRRGRRRGQ SAAMSEINVT PFVDVMLVLL IIFMVAAPLL TVGVPVKLPE TAANALPTEQ EEPLTITIAA DGRLTIQTTE TPEAELIPKL SAIAAERTSK KVFLRADGAI PYERVAQVMG ALNRGGFQDI GLVTDVGGPT FGGSGG
|
| |