Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3711 |
Symbol | |
ID | 5077859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 347150 |
End bp | 348412 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640481434 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001166096 |
Protein GI | 146275936 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0336995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGGA CAGCCGCAGC ACTCGCCGAA GCGCCCGCGC GCGAGGATCG CGTCTCGCCG CGCGTGCGCC ACCTGCTCGA AGCGTCGCGT GCGGCTTTCG TGAAGGACGG CTTCGATGCG GTCAGCATCG ACGCGATCGC CCGAACTGCC GGTGTCAGCA AGGAAACGAT CTATCGCCAC TTTCCCGACA AGGAGGCGCT TTTCCGCGCC GCGCTCGACG ATATGGCGGG GCAGTTCGCC TCGCGCACCG AGGCCCTTCA TCGCGCCGGA CTGACGCCGG TCGAGGAGCT CGCGGGGATG GCGCGCGCGA TCCTGGATGC GGCGGTGGAC GGTGGTTTGC TGAGCCCGCT CTGGGTCGCG GCGGGCCTTG GCGGACGCAT GCCGGATTTC GCGGCGGAGT TGCAACTTGG CCTGTCGGCA CGGATGGAAC CCGTGCGGCA GGCACTCGAA GCGGTGTCGC TGGCGCGCGG AAGCCGCGAA GAGGTGGGCA TCGAGGACGC GCTCGATTTC GGTTCGCTCG CCGTGGAAGG GCCTGCGCTG TTGCTCGGCT TTCCCGCCCC CGCACCAGAA CACCGCGCCT TGCTATCCAT GCGTGTCGCC GAATTGTTCT CAGACGGCAT ACGCGGCATG CCGAAGAGGG CGCAGTTAGT GCCGGATCAG GACGGCGTCT CTGATTTCAC GGGAGAATCC GGATCGTTCG CCCCGCACCT TCGTCGGCTG CTCGACGTGG CGGCCGCACA CTTTCTCCGT TCGGGCTACG AGGCGGCCAG CCTTGCGGAC ATCGGCAGCG AGGCGAAAGT CGGGCGGGGT ACGCTCTATC GTCACTTCGG CCATAAAGCC GGGCTTTTCG ATGCAGTGCT GCGGGACCGG GCGGCATCGG TCGCGGTGGC CGCCCGGCCT CCCGCACTCG AACCCGGCGG TGGTGTCGCC ACGCTCGAGC GATTCCTTTT CGCCGCGGGC GCTTGCCTGA CGGGCGCTGC GTCGGTCGCG CTGCACCGCG CGGCAATGGC GGCGTCACGC CGCGATGCCG CCTTGGCGCG TGCCATCCAC GACATGGTGA GGGCGCCCTG GGCGCATCCT CTTTCTGACT GGATTGCAGC TGAAGGCGGG CACGCCGATA GCGACTGGCT GGCGCGGCAG GCGCTGGTCC TCGCTATGCA GGGCAACCGT GCCATCGCGG CAGGCCAAGG GCTGACAGGC GATGCCGCGC GCCGTCACGC GCATCGCATC GCCCGCATCT TCCTTGACGG TTACCGCGCC TGA
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Protein sequence | MDRTAAALAE APAREDRVSP RVRHLLEASR AAFVKDGFDA VSIDAIARTA GVSKETIYRH FPDKEALFRA ALDDMAGQFA SRTEALHRAG LTPVEELAGM ARAILDAAVD GGLLSPLWVA AGLGGRMPDF AAELQLGLSA RMEPVRQALE AVSLARGSRE EVGIEDALDF GSLAVEGPAL LLGFPAPAPE HRALLSMRVA ELFSDGIRGM PKRAQLVPDQ DGVSDFTGES GSFAPHLRRL LDVAAAHFLR SGYEAASLAD IGSEAKVGRG TLYRHFGHKA GLFDAVLRDR AASVAVAARP PALEPGGGVA TLERFLFAAG ACLTGAASVA LHRAAMAASR RDAALARAIH DMVRAPWAHP LSDWIAAEGG HADSDWLARQ ALVLAMQGNR AIAAGQGLTG DAARRHAHRI ARIFLDGYRA
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