| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4172 |
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| Symbol | |
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| ID | 5060656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4740172 |
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| End bp | 4741644 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476434 |
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| Product | ABC transporter related |
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| Protein accession | YP_001160979 |
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| Protein GI | 145596682 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00812866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCA TCGACCACGT CACCTGGACC TATCCGCACG CCGAACAGCC GAGTCTGCGC
AACCTCAACC TGCGCATCAA CCCAGGCGAG TTCGTGATCC TCTGCGGCGC GTCAGGGTCC
GGCAAGTCCA CCGCACTCCG GCTCATGAAC GGCCTCATCC CCCACTTCCA CGAGGATGGC
GTCCTCACCG GAACCGTCAC TGTCGACGGG CTGGTCACGA CCAATGCAGA GCTGGACGCT
ATCGGCCTCG TTACCGGCAC CGTGCTGCAG CATCCGAAGC GCCAGTTCTT CACCGACACC
GCCCCGGAGG AGGTGGCCTT CGCGATGGAG AACTTCGGCT TCTCACCGGA GGAGATCCGG
CGCCGCGTCG TGAAGACGGT CGAGGATCTC TCCGTGGGGG TACTGGTCGA ACAACGCCTG
CGGGATCTCT CCGGCGGTCA GCAGCAACAG GTCGCGATCG CCGCTGCGAT CGCCCACCGC
CCCAGCATCC TCCTGCTGGA TGAACCCAGC TCGAACCTCT CGTCCGATGC GGTGCAGCGC
CTCACCGCCA CACTCGCCAG CCTGAAGGCG CAAGGGGTGA CCATCGTGAT CGCCGAACAC
CGACTGCGCT ACCTGGATGA CCTCGTCGAC CGAGTCATCG TGATGCGCGA CGGCGCGATC
GACGTCGAGT GGCCCGCGGT ACAACTCCGT GCCGTGCCGG ATGATGAGCT CGCCCGCGAG
GGACTCCGTG GGGTCGTGAG CACGGTCGAT CTGCCGGCTT TGCCAGCCTC GGGCGCTAGC
ATCGTCGCAG GAGTCGACGC ATCGGATGTC CCGGGCGCCG AGCTCGAACT GGAGGCGATC
CGCTGTCACC TCGGCGGGCG CGTCGTGCTC GACATCGACC GCGTCGCCTT CGCCGACGGC
TCGGTTACCG CGATCCGCGG AGTCAACGGT GCAGGGAAGT CCACTTTCGC CCGAATCGTC
ACCGGCCTGC AACGCAGCAC CGGCACCGTC GTCCTCGATG GGAAGGCGAT GAGCCCGCGG
GCGCGCCAGC GTGCGAGCGC GATCGTCATG CAGGACGTCC AGCGGCAGCT TTTCACCGAC
AGCGTCAGAG CCGAAATCCA CCTCGCCGGC ACCGACGCCC CCGAGGCTGC TGATACGGAC
GCGGTCCTCG ATGCCCTAGA CCTCGCGCAC CTCGCCGAAC GGCATCCCCT GTCGCTCTCC
GGTGGCCAAC AACAGCGCCT CGTCGTGGCC GCCGTCCGAG TGGCCGGCCG ACGCATCGTC
GTGTTCGACG AGCCCAGCTC CGGCGTGGAC CGCCACCACC TGCGGTCCAT CGCTGACCAG
ATCCGCCGCC TCGCTGCCAA CGGCGCCATC GTCCTACTCA TCAGCCACGA CGACGACCTG
CTCGCGCTCG CCGCAGACCG GCAGCTCACT CTGGCCCCAC CGCTGAGCTC GCCGCGGAAG
CCGTCATGGC GCTCACGGAG AACCGACCGT TGA
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| Protein sequence | MIRIDHVTWT YPHAEQPSLR NLNLRINPGE FVILCGASGS GKSTALRLMN GLIPHFHEDG
VLTGTVTVDG LVTTNAELDA IGLVTGTVLQ HPKRQFFTDT APEEVAFAME NFGFSPEEIR
RRVVKTVEDL SVGVLVEQRL RDLSGGQQQQ VAIAAAIAHR PSILLLDEPS SNLSSDAVQR
LTATLASLKA QGVTIVIAEH RLRYLDDLVD RVIVMRDGAI DVEWPAVQLR AVPDDELARE
GLRGVVSTVD LPALPASGAS IVAGVDASDV PGAELELEAI RCHLGGRVVL DIDRVAFADG
SVTAIRGVNG AGKSTFARIV TGLQRSTGTV VLDGKAMSPR ARQRASAIVM QDVQRQLFTD
SVRAEIHLAG TDAPEAADTD AVLDALDLAH LAERHPLSLS GGQQQRLVVA AVRVAGRRIV
VFDEPSSGVD RHHLRSIADQ IRRLAANGAI VLLISHDDDL LALAADRQLT LAPPLSSPRK
PSWRSRRTDR
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