Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4077 |
Symbol | |
ID | 5060559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4634866 |
End bp | 4636953 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640476338 |
Product | hypothetical protein |
Protein accession | YP_001160885 |
Protein GI | 145596588 |
COG category | [R] General function prediction only |
COG ID | [COG3973] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0451671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCCG ACCTCACCGC CAACCTCACC GCCGACCTCG AGGCCGAACG CGCGCACATG GTCGCGTCGC GGGCCGCCCT GCACGCGATG CGCCAGCACG CCGAAGCCAT GTACGCCGTC GGCGAGAAGA TCGCCGGGGA TCCCTTCTCC GCCGAGACCC TCGGGGTGGC GTTGGCCCGG CGGGTGGCCG AACTCGCCGA CGACCCCCGT ACGCCGCTGT TCTTTGGTCG CCTCGACCTC GACGGTGCCC CCGAGCCGGG AGGCGAGTCG TTGACCGGCC GCTATCACAT CGGGCGGCGG CACGTCACCG ACCAACTCGG GGAGCCACTG GTGCTGGACT GGCGCGCGCC GGTCAGTCGT GCCTTCTACC AGGCCAGCGT CCGCGACCCG CAGGGCGTAC GGACCCGCCG GCGGTTCGGG TTCGCCGGCG GCGATCTGAC CAGCTTCGAA GACGAGCGTC TCGGCCAGGG TGAGGAGTTC GGCACCGCCA GTAGGATCCT TATCGAGGAG ATCGAACGCC CCCGGGTCGG GCCGATGCGC GACATCGTCG CCACGATCCA GCCCGAGCAG GACGAGCTGG TTCGCGCCGA CCTCGACACC TCGATCTGCG TACAGGGGGC ACCCGGGACC GGTAAGACCG CCGTCGGTCT GCACCGGGCC GCGTACCTGC TCTATCTGCA CCGGGAGCGG CTTCGGCGTA CCGGCGTGTT GATTCTCGGG CCGAACCCGG CGTTCCTCGG CTACATCTCG GCGGTTCTGC CCGCGCTCGG TGAGCTGGAG GTGCGGCAGT CCACCCTGGA GGGGCTCATC GGCCGGGTGC CCGTGTCCGG TGCCGATCCC GTTGAGGCTG AGGTCGTCAA GCACGACCCT CGGATGGCGA CCGTGCTGCG TCGGGCACTG TGGTCGCGGC TGGGTCGAGC TGACTCCTCG ATCCAGGTAT CCGACGGCGC CTATCGGTGG CGTATCGATC CGGGGGTGCT CACCCGCCTG GTTGACGACA CCCGACGAGA GGATCCCCCG TACCTGCTCG GCCGGGAACG CGTCCGCGCC CGGGTCGTCG GTCTGTTGCA ACGCCAGGCC GAGACGCGCT CCGGCGAGTC ACCGGGGGAG CCGTGGCAAC GGCGGATGGG AAAGGCCAAA CCGGTGGTCG AGTTCCTCGA CGCCTGCTGG CCGGCGGTGA CGCCGCAGTC GCTCGTCTTC GAGCTGCTCA GCGACCCGGA GGCGCTGGCT CGCGCGGCGG AGGGCATCCT CACCGAGGCC GAGTGTCAGG CGCTGCGCTG GCCGCGGCCC TTCCGGAGCG TCAAGAGCGT CCGGTGGAGC AGCGCCGATC TCGTGCTGCT CGACGAGGCC GCAGGGCTCC TGGAACGGGA GTCGAGCCTC CACCACATCA TCATCGACGA GGCGCAGGAC CTCTCCCCGA TGCAGTGTCG GGCCATCGGC CGGCGTACCA CGCACGGTTC GATCACGTTG CTCGGTGACC TCGCCCAGGG CACAGCACCG TGGGCGGCGA CCGACTGGGA GGAGTCGCTG CGGCACCTGG GCAAGCCCGA CGCGTCGGTG GTGCCGTTGA CCACCGGGTT CCGCGTACCG GAGGCGGTGG TTGCGTTGGC CAACCGGCTG CTGCCTGCTT TGGCGGTGAA TGTCCCCCCG GCGGTGTCGC TGCGTTCGGA CGGCAGTCTT GTCCTGCGCC GGGTCGACGA CCTGGCCGCC GAGGTGGTCG CGGAGCTGGC CGCGACCCGT ACGCTGCCCG GTTCGGTCGG GGTGATCGTC GCTGACCGCC TCCTCGACGA GCTACGGTCC GCGCTCGTCG CGGCCGGCGA AGAGCCCGGG GAGCTCGACG CCCCAGTGAG CAGGCGCGTC ACCGTGCTCC CGGCAACGCT GGCCAAGGGC TTGGAGTACG ACCATGTGAT CGTCGTCGAA CCGGCGGAGA TCGTGGACGC GGAACCGCGC GGCCTGCACC GGCTCTACGT CGTGCTCACT CGCGCGGTGA CCCGGTTGAC GGTGCTGCAT GCCCGAGCGT TGCCCGTAGC GCTCTCCACC GATGCGCTCG ACCACGCCAT CGGTCCCGAG GTACCCGCTC CGGCATGA
|
Protein sequence | MPADLTANLT ADLEAERAHM VASRAALHAM RQHAEAMYAV GEKIAGDPFS AETLGVALAR RVAELADDPR TPLFFGRLDL DGAPEPGGES LTGRYHIGRR HVTDQLGEPL VLDWRAPVSR AFYQASVRDP QGVRTRRRFG FAGGDLTSFE DERLGQGEEF GTASRILIEE IERPRVGPMR DIVATIQPEQ DELVRADLDT SICVQGAPGT GKTAVGLHRA AYLLYLHRER LRRTGVLILG PNPAFLGYIS AVLPALGELE VRQSTLEGLI GRVPVSGADP VEAEVVKHDP RMATVLRRAL WSRLGRADSS IQVSDGAYRW RIDPGVLTRL VDDTRREDPP YLLGRERVRA RVVGLLQRQA ETRSGESPGE PWQRRMGKAK PVVEFLDACW PAVTPQSLVF ELLSDPEALA RAAEGILTEA ECQALRWPRP FRSVKSVRWS SADLVLLDEA AGLLERESSL HHIIIDEAQD LSPMQCRAIG RRTTHGSITL LGDLAQGTAP WAATDWEESL RHLGKPDASV VPLTTGFRVP EAVVALANRL LPALAVNVPP AVSLRSDGSL VLRRVDDLAA EVVAELAATR TLPGSVGVIV ADRLLDELRS ALVAAGEEPG ELDAPVSRRV TVLPATLAKG LEYDHVIVVE PAEIVDAEPR GLHRLYVVLT RAVTRLTVLH ARALPVALST DALDHAIGPE VPAPA
|
| |