| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4068 |
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| Symbol | |
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| ID | 5060550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4626526 |
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| End bp | 4627710 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476329 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001160876 |
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| Protein GI | 145596579 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.18733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGGG AGATCAACGA CATCCTGCAA CGCGGCGCGG ACGGTGGGCG GATCACGCCC
GACGAGGCCC TGCTGCTCTA CACCGAAGCG CCCTTTCACG CGCTGGGTGA GGCGGCCGAC
GCGGTACGGC GGCGGTGGTA CCCGGACAAC ATCGTCACGT ACCTGATCGA CCGCAACATC
AACTACACGA ACGTCTGCGT GACGGCGTGC CGGTTCTGCG CCTTCTACCG TGCGCCCAAG
CACCGGGAGG GCTGGACCCA CCCGACCGAG GAGATCCTGC GCCGTTGCGG CGAGGCGGTT
GAGCTGGGTG CCACCCAGGT GATGTTGCAG GGTGGGCACC ATCCCGACTA CGGGGTGGAG
TACTACGAGG AGCTCTTCTC CTCGGTGAAG CGGGCGTACC CGCAGCTCGC CATCCACTCG
ATCGGCCCGA GCGAGATCCT GCACATGGCG AAGGTGTCCG GCGTGGGTCT GACCGAGGCC
ATCACCCGCA TCAAGGCGGC TGGCCTGGAC TCGATCGCGG GCGCCGGCGC CGAGATGCTG
CCCGCCCGGC CGCGGAAGGC GATCGCGCCG CTGAAGGAGT CCGGGGAGCG CTGGCTCGAG
GTGATGGAGC TCGCCCACCA GCAGGGCGTC GAGTCGACCG CGACGATGAT GATGGGAACC
GGTGAGACCG CCGCTGAGCG GATCGAGCAC CTCCGGATGA TCCGCGACGT GCAGGACCGG
ACGCGGGGCT TCCGGGCGTT CATCCCGTGG ACCTACCAGC CGGAGAACAA CCACCTCAAG
GGCCGGACCC AGGCCACCAC CCTGGAGTAC CTGCGGTTGG TGGCGGTGTC CCGGCTCTTC
TTCGAGACGG TGCCGCACCT CCAGGCGTCG TGGCTCACCA CCGGCAAGGA TGTCGGCCAG
CTCGCGCTGC ACATGGGGGT TGACGATCTG GGCTCGATCA TGCTGGAGGA GAACGTCATC
TCCTCGGCGG GCGCGAGGCA CCGTTCGAAC CTGCACGACC TGATCGGAAT GATCCGCTCG
GCGGACCGGA CCCCCGCCCA GCGGGACACC CACTACCGCC GGCTCGCTGT GCACCACACT
CCCGCGGACG ACCCGCGGGA CGACCGGGTG GTGTCGCACT TCTCGTCGAT TGCCCTGCCA
GGCGGTGGCG CCGGGAAGAC GCTGCCACTG GTCGACGCCG GCTGA
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| Protein sequence | MSREINDILQ RGADGGRITP DEALLLYTEA PFHALGEAAD AVRRRWYPDN IVTYLIDRNI
NYTNVCVTAC RFCAFYRAPK HREGWTHPTE EILRRCGEAV ELGATQVMLQ GGHHPDYGVE
YYEELFSSVK RAYPQLAIHS IGPSEILHMA KVSGVGLTEA ITRIKAAGLD SIAGAGAEML
PARPRKAIAP LKESGERWLE VMELAHQQGV ESTATMMMGT GETAAERIEH LRMIRDVQDR
TRGFRAFIPW TYQPENNHLK GRTQATTLEY LRLVAVSRLF FETVPHLQAS WLTTGKDVGQ
LALHMGVDDL GSIMLEENVI SSAGARHRSN LHDLIGMIRS ADRTPAQRDT HYRRLAVHHT
PADDPRDDRV VSHFSSIALP GGGAGKTLPL VDAG
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