| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3888 |
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| Symbol | |
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| ID | 5060366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4450276 |
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| End bp | 4451433 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476145 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_001160696 |
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| Protein GI | 145596399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAGCG AATTCCCTCC CGATGTGGCG GTGGTCGGTG CGGGACCGAT CGGCCTGGCC
ATCGCCTGGC GGTGCGCGGT GCGTGGGTTG CGGGTCGTCG TGCACGATCC GGATCCCGGT
TCGGGTGCGG TGTACGCCGC CGCGGGGATG CTCGCGCCGG TCGCCGAGGC GTACTTCGGG
GAGCACGAGC TGACCGGCCT GCTCACTGAG TCGGCGGCGC GCTGGCCGGC GTTCGCCGCT
GAGCTGGCCG CCGCCTCCGG CACCGACCTC GGCTACCGCA GCGAGGGCAC GCTGATGGTC
GGGCTCACCA CCGACGATCT CGCGGTGGCC CGCCGGCTCT GGGCGTACCA GCAGGGGCTG
GGGCTGCCGG TCACCCCACT GCGCCCCTCC GAACTGCGAG ATCGCGAGCC GGCCCTGTCA
CCCCGCACGC GGGGTGGCGC CTACGCCGGT ACCGATCACC AGGTGGACCC GCGGCGGCTG
GTGTCGGCGT TGCGTACCGC CACCGAGCGG GCGGGGGGAG TCCTGGTGCC GACTCCGGTC
CAGCGGCTGA CCGAGGTGAC CGCGGGGACC ACGGTGGTCG CGGCCGGGTG CGGCACCGCC
GCGCTGACCG GGCTGCCGGT CCGCCCGGTC AAGGGGCAGG TGCTTCGGCT CCGCGCTCCC
GACGGGCCGG GCTTCCAGCA CGTGATTCGG GGATTCGCTG ACGGGGAGCA GGTCTACCTC
GTTCCTCGGC AGGACGGGGA GGTCGTGGTT GGGGCGACCT CGGAGGAGCG CACCGACACC
ATGGTGACCA GCGGTGCGGT GTTGCGGTTG CTTCGGGCCG CCACCGACCT GGTGCCCGAG
GTGGCCGAGT ACGAGCTGAT CGAGGCACTC GCCGGGCTCC GTCCGGGCAG CCCGGACAAC
GCGCCGATCC TTGGTCCACT CCCCGGACGG CCCGGGGTGC TCGCTGCGAC CGGGCACCAC
CGGCACGGGA TCGTGCTGAC CCCGGTCACC GCCGACCTGA TCGCCGACCT GATCGCCACC
GGTACGCCGG ATCCGCTGCT CGCTCCCTTC ACCCCGCAAC GCCTCGGGCG GGTCGCATCC
CGCCCGCCCG ACACCGCCGC CCCGGCGCGC GGATCCGCCG CGGCTGCGCT GACCCCACAG
GAGGAGTCGT GGAACTGA
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| Protein sequence | MVSEFPPDVA VVGAGPIGLA IAWRCAVRGL RVVVHDPDPG SGAVYAAAGM LAPVAEAYFG
EHELTGLLTE SAARWPAFAA ELAAASGTDL GYRSEGTLMV GLTTDDLAVA RRLWAYQQGL
GLPVTPLRPS ELRDREPALS PRTRGGAYAG TDHQVDPRRL VSALRTATER AGGVLVPTPV
QRLTEVTAGT TVVAAGCGTA ALTGLPVRPV KGQVLRLRAP DGPGFQHVIR GFADGEQVYL
VPRQDGEVVV GATSEERTDT MVTSGAVLRL LRAATDLVPE VAEYELIEAL AGLRPGSPDN
APILGPLPGR PGVLAATGHH RHGIVLTPVT ADLIADLIAT GTPDPLLAPF TPQRLGRVAS
RPPDTAAPAR GSAAAALTPQ EESWN
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