| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3548 |
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| Symbol | |
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| ID | 5060022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4067398 |
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| End bp | 4069530 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475802 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001160357 |
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| Protein GI | 145596060 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAACC GTCCCCTTGC TGCCGCCGGT CGTCTCGTCC CACTTCTCCG CGCTGGTCTC
ATCGCCGGCA TCGTGATCGC CGCCCTGGCC TACCCGGTCG CCGCCGCGAC CGGCCTCGGC
GCCAAGGTCA CGGCCCACGC GATGGAACAC AAAACCAAGA TCCTCAAAAC GGCCCTGCCG
GCCGAGACCT CGTACCTGTA CGCGCCGGAC GGCAAGACCG TACTGACGAT GTTCTACGAG
GAGTACCGGC AGTACACCAA GCTCGCCGAC ATGTCGCCGA ACATCCAGCA GGCCATCATC
GCCGCCGAAG ATGCCCGCTT CTACCAACAC AGTGGCGTCG ACCCCAAGGG CATCGCCCGC
GCCTTCGTGG CCAACGCCCG CTCCAGCGGC ATTTCCCAGG GCGCCTCCAC CCTCACCATG
CAGTACGTCC GGATGGCCCT GCGGGACAGC GCCACCACCC CGAAGGAGGT GCAGGAGGCG
ACCCAGCAGA CCAGCCTGCG CAAGGTCCGG GAGATGCGGA TGGCCATGGA TCTGGAGAAG
GAACTGACCA AGGAGCAGAT CCTGGAGCGA TACCTCAACT CCGCATACTT CGGGCATCGC
GCCTACGGCA TCTACGCCGC CAGCGAGATC TTCTTCTCCA AGACCCCGAA GGACCTATCC
GTGGTCGAGG CCGCCACCCT CGCCGGACTG GTCAAGTCGC CATCCCGGTT CGACCCGGCG
ACCTCCGACC AGAAGGAGGC GACCGCCCGC CGCAACTACA TCCTGGACCG GATGACCGCG
CTCGGCTACC TCTCGCCGAA CGCCGCCACC AGCGCCAAGT CCGAACCGAT CGAGCTGACC
CTGAGCTACC CGTCCAACGA CTGCGCGTCG GTGCCGCAGG AGTGGAACAG CTGGGGATTC
ATCTGCGACT ACGTGAAGAA CTGGTGGAGC GCCCAGCCCG CGTTCGGCGA GAACCGCCTC
GAGCGGATGG ACAAGCTGCG CCGGGGCGGG TACCGGATCG TGCTCAGTGT GGACCCCAAG
ATCCAGGAGG CGGCCGAGAA GAACGTCGGC ACAAAGGGGA ACACCGGCAG TCCCTTCGCC
AACGGCATCG TGCTCACTGA GCCCGGCACG GGGCGACTCA AGGCCATGGC GGTGAACCGA
ACCTACTCCC TGAACCTGGA CGGAAATCCG CTCAGCGGCA ACCCGGAGGC CGGCCCGAAG
GTCAAGGCCA ACTACCCGAA CACGGTCGCA CCCCTGCTCG GCGGCGGTGA CCTCCCCGGC
TACCAGGCCG GATCAACTTT CAAGATGTTT CCGATGCTCG CCGCCCTCGA CGCGGGTATG
ACCCTGAACA CCAGCTTCAA CGCGCCGCAC CGGTACCGGT CGGAGATCTA CAACGGCTGG
GCTCCGTCGA ACGCGAGCGG CGCCATGTCC GGCATGCAGA CCATGTGGTC CGGCTTCGGC
AAATCGGTCA ACACGTACTT CGTCTGGCTT GAGGAGCAGG TCGGGGCAGA CCAGGCGGTA
CGCCTCGCCG AACAGCTGGG GCTGCGCTGG CGCACCGATG TGGACCGGCA CCATGCTGCT
CCAGCGAACG CGAAGACCTG GGGCGCCTTC ACCCTGGGGG TCTCCGACGC CACCCCACTG
GAGATGGCGA ACGCCTATGG TGCCGTCGCG GCCGAAGGCC GGTACTGCGA GGCGATTCCG
GTGCAGGCGA TCTACAACCG GGACGGCACT CCGGCGATCT ACCGGACGGC CGGCGGGATT
GAGCGGGAAA TCGCCAAGCC CCGCTGCCGC CAAGTCGTCA GCGCGGACGC CGCCCGGGCC
GCCACCGACG CCGCCCGGTG CCCCACCGGC GACACCCCGG CCCGGGGTGG CTGCGGCGGT
TGGTCAACGG CGGACAGCGT CCGGGGCACC GTGGGCCGCC CGGTGGCCGG CAAGACCGGC
ACCACCGACA GCACCCGGTC GGCCTGGTTC GTCGGGTTCA CACCCGAACT GGCCGCGGCC
AGCTTCATCT CCGACCCGGA CAACCCCTTC AACGCCGTCG GTGACGGCCA GTCGCAGATT
CCCATCCACG CGGTCGCGAA CACCCTGCGC GACGCGCTTG AGGACCAACC GACCCGCGAG
TTCACGCCCC CCTCGGACGC GATCGTCGGC TGA
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| Protein sequence | MSNRPLAAAG RLVPLLRAGL IAGIVIAALA YPVAAATGLG AKVTAHAMEH KTKILKTALP
AETSYLYAPD GKTVLTMFYE EYRQYTKLAD MSPNIQQAII AAEDARFYQH SGVDPKGIAR
AFVANARSSG ISQGASTLTM QYVRMALRDS ATTPKEVQEA TQQTSLRKVR EMRMAMDLEK
ELTKEQILER YLNSAYFGHR AYGIYAASEI FFSKTPKDLS VVEAATLAGL VKSPSRFDPA
TSDQKEATAR RNYILDRMTA LGYLSPNAAT SAKSEPIELT LSYPSNDCAS VPQEWNSWGF
ICDYVKNWWS AQPAFGENRL ERMDKLRRGG YRIVLSVDPK IQEAAEKNVG TKGNTGSPFA
NGIVLTEPGT GRLKAMAVNR TYSLNLDGNP LSGNPEAGPK VKANYPNTVA PLLGGGDLPG
YQAGSTFKMF PMLAALDAGM TLNTSFNAPH RYRSEIYNGW APSNASGAMS GMQTMWSGFG
KSVNTYFVWL EEQVGADQAV RLAEQLGLRW RTDVDRHHAA PANAKTWGAF TLGVSDATPL
EMANAYGAVA AEGRYCEAIP VQAIYNRDGT PAIYRTAGGI EREIAKPRCR QVVSADAARA
ATDAARCPTG DTPARGGCGG WSTADSVRGT VGRPVAGKTG TTDSTRSAWF VGFTPELAAA
SFISDPDNPF NAVGDGQSQI PIHAVANTLR DALEDQPTRE FTPPSDAIVG
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