Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3061 |
Symbol | |
ID | 5059525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3510166 |
End bp | 3513006 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640475311 |
Product | alpha-1,6-glucosidase, pullulanase-type |
Protein accession | YP_001159876 |
Protein GI | 145595579 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.57883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.116697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCC CGCCGATCCC GCGCAAGGCG CTGCTCACTC TCGCCTCGCT GGCGACCCTC ACCCTCGCCG GCACCAACAC GTTCGTCCAC ATCGACCCAT CCGCCGGCAC CGACGTGCTC GCCATGGCCG GTACCGAGCA GTGGGCTGTC GACCACTCCG CCACGCTGCT CACCGCCGGC GAAGACCAAT CGGAGCCCGG CACCACCACG GACCTCGACC TGACCAGGCA GAAGGCACAC TGGATCGATC GCGGCACCCT CGCCTGGCCG ACCGGACCAC CGGGCGGCAC GACGTACGCG CTGGTCGCCG CCGCTTCCGG TGGCGTGACC ATTGTCGACG GTGAACTCGC CGGGACGTAC CGGACAGTTC CGCTACGTGT CCGGCACCAC GGGCTGACCA AGGCACAACG CGAGCGGTTT CCGCACCTGG CGGCGTATCA GGCTCTCGTC CTGGACCGGA AGCACCTGGC CGGGGTGCCG GCGGCGCTGC GCGGGCAGCT TGTGGTGACC GAGCGGGACA CCGACGGCAC CCTGCGCGTC GCCACCGGTG TGCAGGTCCC GGGTGTGCTC GATGACATCT ACGCCCCGGC GACTCGGGCG CGACTCGGTC CAACCTTCGC CGGTGCGGTG CCGACGCTCG CGGTCTGGGC TCCCACCGCC CGTACGGTGA CGCTGGAGTT GTTCGACACT CCGACGGCGC GACCGCGGCC GGTCACCATG AGTCGGGATG ACCGCACCGG TGTGTGGTCG GTGCGGGGAA CCCCCTCCTG GACCGGGAAG TACTACCGCT ACCGGGTCGA GGCGTGGCAG CCGGCGGAGC AGCAGATGGT AACTGCGGCG GTGACCGACC CGTACTCGCT GGCGCTCGCA CCCGACTCCA CCCACAGCCA GATCGTCGAT CTCGCCGACC CGCGGCTCGC ACCACCGGGC TGGACGAACC TGCGTAAGCC GGCGGCGGTA CCGGCGACGA AGGCGCAGAT CTCGGAGCTG TCGGTGCGGG ACTTCTCGAT CGCTGACAGT ACGGTCCCGG CCGAGCGACG CGGCACGTTC CGTGCCTTTA CCGACCCGGT CACCGCGGGA ATGCGACACC TGAAGGCGCT CGGCGACGCC GGGACGACCC ACCTGCACCT GCTCCCGGCG TTTGACTTCG CCACGATCCC CGAACGCCGC GCCGACCAGC AGCAACCCCC CTGCGACCTG GCAGCGCTCC CGCCGGACTC GGACGAACAA CAACGCTGCG TCGCCGCGGT GGCGGACACC GACGGCTACA ACTGGGGGTA CGACCCGCTG CACTACACCG TGCCGGAGGG CGGCTACGCG GTCAACCCGG CCGGGGCGGC GCGGACCACC GAGTTCCGAC GGATGGTCGC CGGGGTGAAC GGCGCCGGGC TGCGGGTGGT GCTCGACGTC GTCTACAACC ACACCTCGGC GACGGGCACC GACCCGAAGT CGGTCCTGGA CCAGGTGGTT CCCGGCTACT ACCACCGGCT GCTGGCGGAT GGCTCGGTCG CCACCTCGAC CTGCTGCGCC AACACCGCTC CCGAGCACGC CATGATGGGC AAGCTCGTGG TCGACTCGGT GGTCACCTGG GCGAAAGAAT ACAAGGTGGA TGGCTTCCGG TTCGACCTGA TGGGTCACCA CCCGAAGGCG AACATGCTGG CCGTCCGCGC GGCTCTGGAC GAGCTGACCG TCGCCCGCGA CGGGGTGGAC GGTCGGGGCA TCCTGCTGTA CGGCGAGGGC TGGAACTTCG GCGAGGTGGC CGACGGCGCG CGGTTCGTTC AGGCAACCCA GGCCAACATG GCCGGCACGG GTATCGGCAC CTTCAACGAT CGGCTCCGGG ACGCGGTGCG TGGGGGCGGT CCCTTCGACG CCAATCCGCG GCAGCAGGGC TTCGCCTCCG GGCTGTTCAC CGACCCCAAC AACGACCCGG TCAACGGTTC GACGGCGCAG CAGCGCGCCC GACTGCTGCA CCAGCATGAC CTGATCAAGG TGGGGCTCAG CGGCAATCTG CGCGGCTACC GGTTCACCAA CACCGCGGGT GAGCAGGTCA CCGGGGCGCA GGTGGACTAC AACGGATCCC CGGCCGGCTA CACGGCCGCG CCGGGTGAGT CGGTCACCTA CGTGGACGCG CACGACAACG AGATCCTGTA CGACGCGCTG GCGTACAAGC TGCCGGCGGA CACCACGGCG GTGGACCGGG CCCGGATGCA GGTGCTCGCG CTCGGCACCG CCGTGCTGGG GCAGGGCACC GGCTTCGTCA CCGCCGGCAC CGAGCGGCTG CGGTCGAAGT CGCTGGACCG CAACTCGTAC AACTCGGGTG ACTGGTTCAA CCAGATCCGC TGGGAATGCG CACAGGGCAA CGGGTTCGGC GTCGGGCTTC CGCCCGAGTC GGACAACAAG GACAAGTGGC CGTACGCCCG GCCCCTGCTG GCCGACCCGG GGCTGGTGCC CGGCTGCGCG ACGATGGACC TGGCCGAAGC TCGTTTTGCC GAACTGCTCC GGATTCGCTC CTCGTCGCCG GTGTTCGGGT TGCGGACAGC AGAGCAGGTG CAGCGGCGGG TGGCCTTTCC GTTGTCCGGC CGTACGGAGC AGCCCGGTGT GCTGACGATG ACGCTGGACA GCCGTGGGCT GGGTGGTCCG TGGAAGTCAG TGACGGTGAT CTTCAACGCC ACCCCGCAGC CGGCCACCCA ACAGCTCATT GACCTACGCG GGGCGGACGT GACACTGCAC CCGGTGCTGC GCACCTCCGC CGACGAGCTG CTGCGGACGT CCTCGTTCGC GGCCGACAGC GGCACCTTCA CGGTTCCGGC TCGCAGCCTG ACGGTCTTCG TGCAGCGGTA G
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Protein sequence | MKPPPIPRKA LLTLASLATL TLAGTNTFVH IDPSAGTDVL AMAGTEQWAV DHSATLLTAG EDQSEPGTTT DLDLTRQKAH WIDRGTLAWP TGPPGGTTYA LVAAASGGVT IVDGELAGTY RTVPLRVRHH GLTKAQRERF PHLAAYQALV LDRKHLAGVP AALRGQLVVT ERDTDGTLRV ATGVQVPGVL DDIYAPATRA RLGPTFAGAV PTLAVWAPTA RTVTLELFDT PTARPRPVTM SRDDRTGVWS VRGTPSWTGK YYRYRVEAWQ PAEQQMVTAA VTDPYSLALA PDSTHSQIVD LADPRLAPPG WTNLRKPAAV PATKAQISEL SVRDFSIADS TVPAERRGTF RAFTDPVTAG MRHLKALGDA GTTHLHLLPA FDFATIPERR ADQQQPPCDL AALPPDSDEQ QRCVAAVADT DGYNWGYDPL HYTVPEGGYA VNPAGAARTT EFRRMVAGVN GAGLRVVLDV VYNHTSATGT DPKSVLDQVV PGYYHRLLAD GSVATSTCCA NTAPEHAMMG KLVVDSVVTW AKEYKVDGFR FDLMGHHPKA NMLAVRAALD ELTVARDGVD GRGILLYGEG WNFGEVADGA RFVQATQANM AGTGIGTFND RLRDAVRGGG PFDANPRQQG FASGLFTDPN NDPVNGSTAQ QRARLLHQHD LIKVGLSGNL RGYRFTNTAG EQVTGAQVDY NGSPAGYTAA PGESVTYVDA HDNEILYDAL AYKLPADTTA VDRARMQVLA LGTAVLGQGT GFVTAGTERL RSKSLDRNSY NSGDWFNQIR WECAQGNGFG VGLPPESDNK DKWPYARPLL ADPGLVPGCA TMDLAEARFA ELLRIRSSSP VFGLRTAEQV QRRVAFPLSG RTEQPGVLTM TLDSRGLGGP WKSVTVIFNA TPQPATQQLI DLRGADVTLH PVLRTSADEL LRTSSFAADS GTFTVPARSL TVFVQR
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