Gene Strop_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2996 
Symbol 
ID5059460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3426766 
End bp3427587 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID640475247 
Productmethyltransferase type 11 
Protein accessionYP_001159812 
Protein GI145595515 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGC GGGGCAGCTT CGACGAGGAT CCCGACATTT ACCAGATGGC CCGGCCGGAC 
TACCCGCGGA GGGTGTACGA GGTGCTCTCG GGCATGGGGT TGGGGCCCGG TGCCCGCGTG
CTGGAGATCG GGCCTGGGAC CGGGCAGGCG ACCAGACCTC TCGTGGCCGC CGGTGCCTCG
GTGCTGGCGG TGGAGCTGGG TGGCCACCTG GCGGCCCGGC TGCGCACGGA CCTGGCGGGC
CACGACGTGA CCGTCATCGA GGGTGACTTC GTCACCGTGC CGCTGCCCGA CGGTGATGTC
GACCTGGCGG TCTGCGCTAC CACGTTTCAT TGGCTGGACC CTGACGCGGC GGTGCGGCGG
CTGGCCCGCC TGGTACGGCC GGGCGGAGGG CTGGCGGTGT GGTGGACCGT GTTCGGTGAC
CCGGACCGTA TCCCGCCCTG GCGGGCGGAA GTGGACAGGT TGTACCGACG CTGGCTACCG
GGGGAGAAGG TCCGCCCGGG GGACCTACCA GCGGTGATGC GGGTTGCCGA GCGCACGGCG
GAGCTGGCGG CAGGTGGCTG GTTCGGCCCC GTCCAGGTCG AGATGATTCG CTGGGAGCAT
CAGCTGACTC CGCGCCGTGT TCGCGGATTG TGGGCGACCT TCTCCGCCGT GCGCGAGTTG
AGCGCTGACC GGCGACGGTC GCTTCTCGAC GGCGTCGCTG AGGTGGTCGC CAGTCAGCCC
GGCGGAGTCG CGGTCGACAA CTATGTCACC GCGCTGTATA CGGCACCGCG CCGGGACGAT
TCTGGGCCGC GCCGCGGCGC TTCAGGACCT TCAACGCGTT GA
 
Protein sequence
MRRRGSFDED PDIYQMARPD YPRRVYEVLS GMGLGPGARV LEIGPGTGQA TRPLVAAGAS 
VLAVELGGHL AARLRTDLAG HDVTVIEGDF VTVPLPDGDV DLAVCATTFH WLDPDAAVRR
LARLVRPGGG LAVWWTVFGD PDRIPPWRAE VDRLYRRWLP GEKVRPGDLP AVMRVAERTA
ELAAGGWFGP VQVEMIRWEH QLTPRRVRGL WATFSAVREL SADRRRSLLD GVAEVVASQP
GGVAVDNYVT ALYTAPRRDD SGPRRGASGP STR