Gene Strop_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2916 
Symbol 
ID5059380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3334829 
End bp3335821 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content74% 
IMG OID640475167 
Productluciferase family protein 
Protein accessionYP_001159732 
Protein GI145595435 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC GATGGGGCAT GACGGTACCG TTGAGCGGGA TCCCGCTGGC CGACCACGCC 
GCGGTCTACC GCGCACTCGA CCAGGCCGGC TTCACCGATG TGTGGTCGGC CGAGGTGACC
GGGGCGGACG CCTTCACGCC GCTGGCGCTG GCCGCCGCCT GGGCGCCGCG GCTGCGGCTG
GGCACGGCGG TGACACCGGT CTTCACCCGA GGACCAGGTC TGCTCGCGAT GAGCGCTGCC
GCGCTCGCCG AGACCGCCCC CGATCGGTTC GCCCTCGGCA TCGGCGCGTC ATCGCCGGTG
ATCGTCCAGG ATTGGAACGC CGGCGAGTTC AGCGAGCCGT ACCGACGCAC CCGTGACGTG
CTCCGCTTCC TGCGCGCTGC CCTGGCCGGA AACACCGTCG ACGGAGCGTA CGACACCTTC
GCCGTCCGGC GCTTCACCCT GGAACGCCCG CCGGCCGTAC CCCCGTCGCT GCTGCTCGCC
GCGCTGCGCC CCGGCATGCT GCGGCTCGCC GCCACCGAAG CCGACGGCGT GATCCTCAAC
TGGCTCGCCG CCACCGACCT ACCGCAGGTG CTGGGCGCGC TCGGCCGGCG TCGCGCCGGC
TTCGAGGTCG TCGCGAGGAT CTTTGTCTGC CCGACCACGG ACGCCGGGTA CGCCCGCGCG
CTGGGTCGCC GGCTCATCAC CAGCTACCTG ACCGTCCCGG CGTACGCGGA GTTCCACCGC
TGGCTGGGGC GCGCCGAGGT CTTTGATCCG ATGTGGACGG CATGGGCCGC GGGAGACCGG
CGGGGCGCCG GTGCGGTGGT ACCGGACGAG GTGGTGGACG CGCTCGTCCT GCACGGCAGC
CCACAGGAGT GCCGGGCCCA GGTGCAGCGG TACGCCGCGG CCGGGGTTGA CGTCCCCGTA
CTGGCGCTGC TGCCGACCCC CGAGCTGGCC GCGGGCGAGG CAACGGCGCT CCTCGACGTG
ATCGCCGGGC TGGGTGGGGG CGAGCCCCGA TGA
 
Protein sequence
MTTRWGMTVP LSGIPLADHA AVYRALDQAG FTDVWSAEVT GADAFTPLAL AAAWAPRLRL 
GTAVTPVFTR GPGLLAMSAA ALAETAPDRF ALGIGASSPV IVQDWNAGEF SEPYRRTRDV
LRFLRAALAG NTVDGAYDTF AVRRFTLERP PAVPPSLLLA ALRPGMLRLA ATEADGVILN
WLAATDLPQV LGALGRRRAG FEVVARIFVC PTTDAGYARA LGRRLITSYL TVPAYAEFHR
WLGRAEVFDP MWTAWAAGDR RGAGAVVPDE VVDALVLHGS PQECRAQVQR YAAAGVDVPV
LALLPTPELA AGEATALLDV IAGLGGGEPR