Gene Strop_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2399 
Symbol 
ID5058862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2693584 
End bp2695002 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content72% 
IMG OID640474658 
Producthypothetical protein 
Protein accessionYP_001159224 
Protein GI145594927 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.722236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTGG TCGAGGAGTC GCCGTACCGT TTCCGGATCG ACCGGCGGGA CCCGATGCGG 
GTTCCCGGAG TGGTGTTCGC GGCCGAGGCG CTGCTGCCGG AGATCGGGGC GGACGGGTCG
TTGGAGCAGG TCGCGGCGGT CGCCACGCTG CCCGGGATCG TTGACGCCTC GTTCGTCATG
CCGGACGTGC ATCTGGGCTA CGGCTTTCCG ATCGGCGGGG TGGCCGCCAC CGATGTGGCG
GCGGGCGGGG TGGTGTCCCC GGGCGGGGTG GGCTTCGACA TCTCGTGCGG TGTTCGGCTG
CTCACGGCCG ACCTTGATCT GGCCGGGCTT CGTCCCCGGC TCGACGCCGT CATGGATGGG
CTGGCTGAGG CGACGCCGCG CGGGGCGGGA CGGGGCGCGG CGTGGCACCT GGCGGGCCGC
TCGGACGTGG ACGGGGTGCT GCGCGACGGG TCGCGGTACG CGGTGCAGCG CGGCTTCGGC
GTTGAGCGGG ACCTCGCACG CTGCGAGGAC CAGGGTGCGC TGGGCGACGC CGACCCGGGT
GCGGTCAGCG ACCGGGCCAT CGAGCGCGGC GCGAAGCAGG TGGGCAGTCT CGGTTCGGGC
AACCACTTCC TCGAGGTGCA GGCCGTCACG GAGGTGTACG ACCAGCGCGT CGCCGAGGTC
TTCGGGCTGC GGCCCGGCCA GGTCTGCGTA ATGATCCACT GCGGCTCTCG AGGACTGGGG
CACCAGATCT GCGCCGACTA TGTGCGCCGG ATGGAGAGGG CCATGCCCCG CTACGACATC
CAGGTGCCGG ACCGGCAGCT TGCCTGCGCT CCGGTCTCGT CCCCGGAGGG GCAGGCCTAT
CTCGGCGCGA TGGCGGCCGC GGCCAACTAC GCCCGGGCGA ACCGCCAACT ACTCACCCAC
GTGGCCCGGT TGGTCTTTCG GCGGGTCACC GGCGCAGGTC TGGACGTGGT CTACGACGTC
TCACACAACC AGGCGAAGAT CGAGACTCAC GGTGTGGATG GCGAGCGGCG TTCGCTCTGT
GTGCATCGCA AGGGTGCCAC CCGAGCGCTA CCTCCGGGGC ACCCCGACCT GCCGGCGGAG
CTGGGTGAGG TCGGGCAGCC GGTACTCATC CCCGGTTCGA TGGGCACCGC GTCCTACGTG
CTGACCGGGG TGTCCGGTGC CCCCGCCTTC GCCTCCACCT GTCATGGGGC CGGGCGGGTG
CGCAGCCGGA AGCAGGCGGT GCGGGCCGAG CGTGGCCAGG ATCCGCGCGA GCAGCTCGTT
GCGCAGAACA TCGCGGTACG CGGTGCTTCA CGGCGAGGTC TGGCCGAGGA GATGCCGACA
GCGTACAAGG ACATCGATGC CGTGGTCGAG GCCACCGAGG GCGCTGGGCT GTGCCGGAAG
GTCGCCCGGT TGGTGCCGAT CGGCGTCGTC AAGGGCTGA
 
Protein sequence
MDLVEESPYR FRIDRRDPMR VPGVVFAAEA LLPEIGADGS LEQVAAVATL PGIVDASFVM 
PDVHLGYGFP IGGVAATDVA AGGVVSPGGV GFDISCGVRL LTADLDLAGL RPRLDAVMDG
LAEATPRGAG RGAAWHLAGR SDVDGVLRDG SRYAVQRGFG VERDLARCED QGALGDADPG
AVSDRAIERG AKQVGSLGSG NHFLEVQAVT EVYDQRVAEV FGLRPGQVCV MIHCGSRGLG
HQICADYVRR MERAMPRYDI QVPDRQLACA PVSSPEGQAY LGAMAAAANY ARANRQLLTH
VARLVFRRVT GAGLDVVYDV SHNQAKIETH GVDGERRSLC VHRKGATRAL PPGHPDLPAE
LGEVGQPVLI PGSMGTASYV LTGVSGAPAF ASTCHGAGRV RSRKQAVRAE RGQDPREQLV
AQNIAVRGAS RRGLAEEMPT AYKDIDAVVE ATEGAGLCRK VARLVPIGVV KG