| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1409 |
|---|
| Symbol | |
|---|
| ID | 5057862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1585894 |
|---|
| End bp | 1587252 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473678 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158254 |
|---|
| Protein GI | 145593957 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.464754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGATCG TCGTTGGGCT CCTCTTCATC GTTGTCCTCA CCGCGGCCAC CGGTTACTTC
GTGGCCCAGG AGTTCGGCTA CGTCGCCGTC GATCGGGGCA AGCTCAAGCA GCGTGCCGCC
GAGGGCGACA AGGCCTCGTC CCGGGCCCTG GAGGTGACCG GGCGGCTGTC GTTCATGCTC
TCCGGTGCCC AGCTCGGCAT CACGGTCACC GCGCTGCTGG TCGGCTACGT CGCCGAACCG
TATCTCGGCG CCGGCCTGGC CGACTTGCTC GGATTGTCCG GAATATCCGA TACGGTCAGC
CGGCCGCTGT CCATCGCGTT GGCCCTGCTC ATCGCCACCA TCGTGCAGAT GGTGCTCGGT
GAACTGGCAC CCAAGAACCT CGCTATCGCC CGCCCCGAGG CGCTCGCTCG GGCGCTCGCC
GGTTCTACCC TGGTCTACCT CAAGGTCGCC GGCCCAGTGA TCAAGCTCTT CGACCGGGCC
GCCGTCCGGT TGCTGCGCCG GGCGGGGGTG GAGCCCGTCG AGGAGCTGCC CAGCGGGGCG
ACCCTGGAGG ATCTGGAGCA GATCATCGCC GAGTCCCGCG AGGGCGGGCA TCTGACCGCG
GAGATGTCCA CCCTGCTCGA CCGGGGGTTG GATTTCCGTC AGCTCACCGC CGGGGAAGCC
ATGGTGCCCC GGGTCGACGT GCACACCGTC CGCGCCCACG AGCCGGTCAG CCGCGTCGTC
GAGCTACTCG AGACCGGCCG CTCCCGGTTT CCCGTCCAGG GGGCCGAGGG CGTCGACGAC
GTGATCGGTG TGACCGGCAT CGCCGACGTG CTCGGCGTGC CGCTGGAGCG CCGAGCCACC
ACCCCGGTCG GCACGGTGGC CGTCCCCCCG CTGCTGGTGC CGGAGACCCT GCCGTTGCCG
ACGGTGCTGG ACCGCCTGCG CTCCAGTCAC CGGCAGCTCG CCTGCGTGGT TGACGAGTAC
GGCGGCTTCG CCGGCGTGAT CACCCTGGAG GACATCGCCG AGGAACTGGT GGGGCCGATC
CGGGACGAGG ACGATCCGCC GGAGCGGATA CCGACCCGGC AGCGCGACGG CTCCTGGGTG
GTGCCGGCCC GCTGGCGGAT CGACGAGGTC GCCGACAGCA CCGGTATCTC ACTGCCGGTG
GCCCCGGAGT ACGACACGCT CTCCGGCCTG GTCATGCGGG AGTTGGGCCG GGTACCCGAG
GTCGGCGACC AGTTGGAGGT CACCCTGCCG GCAGACGGGG ATGAGGCGGT TGCCGGCCCC
CGGGCGCTGG TCGAGGTGCT CGTGGTCGAC CGGCACGTCG CCGACTCGGT CCGGTTGCGC
CTACAGGAGT CGGAAGGCCA GCCGGAGGTG CAGTCATGA
|
|---|
| Protein sequence | MLIVVGLLFI VVLTAATGYF VAQEFGYVAV DRGKLKQRAA EGDKASSRAL EVTGRLSFML
SGAQLGITVT ALLVGYVAEP YLGAGLADLL GLSGISDTVS RPLSIALALL IATIVQMVLG
ELAPKNLAIA RPEALARALA GSTLVYLKVA GPVIKLFDRA AVRLLRRAGV EPVEELPSGA
TLEDLEQIIA ESREGGHLTA EMSTLLDRGL DFRQLTAGEA MVPRVDVHTV RAHEPVSRVV
ELLETGRSRF PVQGAEGVDD VIGVTGIADV LGVPLERRAT TPVGTVAVPP LLVPETLPLP
TVLDRLRSSH RQLACVVDEY GGFAGVITLE DIAEELVGPI RDEDDPPERI PTRQRDGSWV
VPARWRIDEV ADSTGISLPV APEYDTLSGL VMRELGRVPE VGDQLEVTLP ADGDEAVAGP
RALVEVLVVD RHVADSVRLR LQESEGQPEV QS
|
|---|
| |