| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0280 |
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| Symbol | |
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| ID | 5056718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 321637 |
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| End bp | 323688 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472552 |
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| Product | helicase c2 |
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| Protein accession | YP_001157143 |
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| Protein GI | 145592846 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0332575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCCGC CCCGCGCCGC CACCGATTCC GCCAGCCCAC AGTCCCGAAC CGGCAGCCGG
CGCTCCGGCG GTGGGGTGAC CGGAGCCGAC CTACTCGCCG CGGCGGTCAA CGCGGTCCCC
GGAGGCGCGG CGCGCCCGGG CCAGCAGGAG ATGACGACGG CGATTGAGAC AGCCGTAGCC
GCCCGCGAGC ACCTACTGGT GCAGGCGGGC ACCGGCACCG GCAAATCCCT GGCGTACCTG
GCGCCCGCGC TCACCGTTGA CGGCCCGGTG GTGGTCTCCA CCGCCACCCT CGCGCTCCAG
TCCCAACTGG TTGACCACGA CCTTCCCCGG CTGGCCGACG CGGTGGAGCC GCTGCTCGGC
CGACGACCCA CCTTCGCGGT ACTCAAGGGG CGGCACCACT ACCTCTGCCT GGCCCGGCTC
GACAACGCCA CCGAGGAGGA GCCCGGCGAC ACCCTCTTCG ACTCGCCGAA GCCGGGCGGC
ACGGCGTGGC TCGGCGAGGC CGGGCGCCTC GGCCGGCAGG TCCAGCGGCT CCGCGACTGG
GCCGAGAAGA CTGACACCGG CGACCGGGAC GAACTTGATC CCGGCGTTGA CGAGCAGGCC
TGGCGTCTGG TGTCCATGCC GGCGCGGGAG TGCGTTGGTA CGGCCCGTTG CCCGTTCGGC
GCCGAGTGTT TCGCCGACGC CTCCCGGGCC CGCGCCCGCG AGGCCGACGT CGTGGTGACC
AACCACAGCC TGCTCGCGGT GGACATGCTC GCCGGACGAC ACATCGTTCC GCCGCACCAG
CTGCTCATCG TGGACGAGGC GCACGAACTG GCCGACCGGG TCTCCTCCGC CGCGCAGGCA
GAGTTGGTGC CGGAATCCAT CGACCGATCC ACCCGCCAGG CCCGCCCACT GCTCCGCCCC
GAGACGGCCG AGGCGCTCAC CGCGGCGGGT GACGCCCTGG CCGTCGGGCT CGCCGAGGCA
CCCGCAGGTC GGCTCACCAC CGGGCTGCCG ACCCCGCTGC AGGAGGCGTG CACGCTGCTC
GACGCCGCGA CCCGCGCGGC CCTCGACTCG ATCGGTGAGG TCAAGGCTGA CGACCCGGAC
CCGGTCCGCA AGCAGCAGGC CAAGGCGGTG CTCGACGAGC TGTCCGGCAC CGCGCAGCGG
CTGTTGGAGG AGGCAGACCA CGACGTGGCC TGGGTGGAGC GCAACGATGC CACCGGGCGA
CGGGCACTGG TGGTCGCCCC GCTCTCGGTG TCCGGCACCC TCGCCACCCA CCTTTACGAA
GAACGCACCG TCGTCGCCAC CTCGGCCACC CTGACTCTGG GGGGCCGCTT CGACACCGTT
GCCCGGGCTC TGGGCCTGGA GGTGCCGGCT GCCACAACCG AGGCACCCGT CACCTCCGGT
CCCGACTGGC AGTCGCTCGA CGTCGGCTCT CCGTTCGACT ACGCCCGACA GGGGATCCTC
TACGTCGCCG CGCACCTCCC CCGGCCCAGC GCCTCCGGGC TGCCCGACGC GGCCGGCGCG
GAGCTCCTCG AGCTGGTCGA GGCGCTCGGC GGACGGACAC TCGGGCTCTT CTCGTCCCGG
CGGGCCGCGC AGCAGGCGGC GGAGCTGCTC CGGGAACGCA CCGACCTGCC CGTGCTGCTC
CAGGGCGAGC AGGCGCTGCC ACTGCTGGTT CGCCGGTTCC GCGAAGAACA GGCGAGCTGC
CTGTTTGGGG TGATGTCGCT CTGGCAGGGG GTGGATGTGC CGGGCGACGC CTGTCAACTG
GTGGTCGTTG ACCGGCTGCC CTTCCCGCGA CCCGATGAGC CACTCGCCGC TGCCCGCGCC
GCCGCCGTTG ACGCCACTGG TGGATCGGGG TTCGCCGCGG TCAGCGTGCC GATCGCAGCC
GTCCGGCTGG CCCAGGGCGT GGGCCGGCTG ATTCGCGCCA CCGACGACCG GGGGGTGGTC
GCGGTGCTCG ACTCCCGGCT GGAGAATGCC CGAGGATACG GCCCGTTCCT CCGCCGGTCG
CTTCCGCCGT TTTGGTACAC GACCCGTCCC GACGTGGCCC GCGGCGCCCT CGAACGCCTC
GCCAAGGCAT GA
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| Protein sequence | MTPPRAATDS ASPQSRTGSR RSGGGVTGAD LLAAAVNAVP GGAARPGQQE MTTAIETAVA
AREHLLVQAG TGTGKSLAYL APALTVDGPV VVSTATLALQ SQLVDHDLPR LADAVEPLLG
RRPTFAVLKG RHHYLCLARL DNATEEEPGD TLFDSPKPGG TAWLGEAGRL GRQVQRLRDW
AEKTDTGDRD ELDPGVDEQA WRLVSMPARE CVGTARCPFG AECFADASRA RAREADVVVT
NHSLLAVDML AGRHIVPPHQ LLIVDEAHEL ADRVSSAAQA ELVPESIDRS TRQARPLLRP
ETAEALTAAG DALAVGLAEA PAGRLTTGLP TPLQEACTLL DAATRAALDS IGEVKADDPD
PVRKQQAKAV LDELSGTAQR LLEEADHDVA WVERNDATGR RALVVAPLSV SGTLATHLYE
ERTVVATSAT LTLGGRFDTV ARALGLEVPA ATTEAPVTSG PDWQSLDVGS PFDYARQGIL
YVAAHLPRPS ASGLPDAAGA ELLELVEALG GRTLGLFSSR RAAQQAAELL RERTDLPVLL
QGEQALPLLV RRFREEQASC LFGVMSLWQG VDVPGDACQL VVVDRLPFPR PDEPLAAARA
AAVDATGGSG FAAVSVPIAA VRLAQGVGRL IRATDDRGVV AVLDSRLENA RGYGPFLRRS
LPPFWYTTRP DVARGALERL AKA
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