Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0255 |
Symbol | |
ID | 5056693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 289971 |
End bp | 290606 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472527 |
Product | methyltransferase type 12 |
Protein accession | YP_001157118 |
Protein GI | 145592821 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0188144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACT TCGACGCCTT CTTCAACGTT GACTACTGGG ACCAGCGATA CAGTGAGACC GGGCAGGTGT GGAGCGGCGA GCCCAACCCC GTGCTCGTTG CGGAGGTCGC TCCCCTTGCA CCGGGTACGG CCCTGGAGGT GGGCTGTGGC GAAGGCGCGG ACGCCATGTG GCTGGCCGGA CAGGGCTGGC AGGTCACCGG CGTGGACTTC TCCGCGCAGG CCCTCTCCCG TGCCGCCGAG CGCGTACCCG CCTCCCTGGC CGAGCGTCTG AGGTGGCAGC GAGCGGATAT TCGCGACTGG CAGCCCGACG ATGGCCCCCG CTATGACCTG GTATCCACGT CCTTCCTGCA TTTCTCCGGG GCACTGCGGC GAAGGGTGTT CGCCACGCTC GCCACCCGGG TGGCCCCGGA CGGCCACCTG CTGATCGTTG GGCACCACCC CAGCGACCTG GACACCGCCA TGCCCCGACC GCCGGAACCC GACCTGTTCT ACACGGCCGA CGAGTTGGCG CAGGCCCTGC CCGCCCGCGA CTGGGAGGTG CGTACCCGGG CCGCCCGTCC ACGCGACGCC ACCACACCGG ACGGCACGCC GGTGACCATC CACGACACCG TGCTCACCGC CCGCCGCGTC CAGTGA
|
Protein sequence | MTDFDAFFNV DYWDQRYSET GQVWSGEPNP VLVAEVAPLA PGTALEVGCG EGADAMWLAG QGWQVTGVDF SAQALSRAAE RVPASLAERL RWQRADIRDW QPDDGPRYDL VSTSFLHFSG ALRRRVFATL ATRVAPDGHL LIVGHHPSDL DTAMPRPPEP DLFYTADELA QALPARDWEV RTRAARPRDA TTPDGTPVTI HDTVLTARRV Q
|
| |