| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0029 |
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| Symbol | |
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| ID | 5056460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 34731 |
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| End bp | 37298 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640472294 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001156892 |
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| Protein GI | 145592595 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG ATGATGACCA TTCGCGGTGG TCAGGCGGAC AGATGGGGCT GCCCGACCTG
CTCCGTGGAC ACCGGCTCAC CGCTGGCCTG ACTCAGGCCG AACTGGCGGG CCGGGCCGGC
ATCGGTGTCC GGACCGTTCG GGACGTGGAG CGCGGCCGTT CGTCGCGGCC CCAGCGGACG
ACCGTCGAAC TGCTCGCGAC CGCCCTTGGG CTGGTCGGGG CAGCGCGGTC TACCTTCGTC
GCGGCCGCCC GACACGTGCC GACGCCCCGA TACCCGGAGT CAGAGTCACT GCTCCACGTC
GGCCCGGACG GCATGGTAAG GCCGACCACG CTGCCCCCGG CCCCCGAGCT GATCGGTCGG
GAGCGTGACG TGGCCGAGCT GGTCGGGATG CTCACCAGCG AGGTGACCGC CCGGCTGGTG
AGCCTGGTCG GGTTGGCTGG TGTTGGCAAG ACGGCACTGG CGCTGTCGGC GTCCCACGCG
GCCGCCGGGC ACTTCCCGGG TGGTGTGGCC GGGGTCCTCA CCGGGGAGGG AACGGATGTT
GCGGAGCTGC TTGCCGCCTC GGCGGCGGTC TTCGGGGCGG CGCGTCTCCC CGAGCTTGCC
ACCCGCCTCG CCGGTCAACC GGCACTGCTG CTTGTGGACG CGGTGGAGCG GGCTCCCGGC
ACAGTCGCCG AAGCTGTGCA CCAGCTCGCG ACCGTGGTGC CGTCCCTACG GGTACTCGTC
ACCGGCCGGC ATCCGGTCGG GCTGCGCGGT GAGCGAGTCC GACCCGTAGC CCCGCTCGAC
ACGCCGTCGC CGGACCGCGA CGAGGCTGGT CCGGTGGTCC TCGCCCGGTT TCCGGCGGTG
GCGCTGTTCA TCGCCCGACT CAAGCTGGTA CGACCGAACC CGCCGACGGC GGCGGAGCTG
CCGGCGCTGG CCCGGCTGGT CCGCCGCCTC GGTGGCCTTC CGCTGGCCAT CGAGCTGATG
GCGGCGCGGG GGCGCATCCT CGACCTCAAC GAGTTGCTTG ACCGGTATGG CGATCGGGTT
CTCGACCTGG CCACCTTCTC CGGCGCAGCC GAGCGGCCGG GCTGGAGCGC GGCTGATCCG
GGCCCGACGC AGCGAACGCC CGCGGCGGTC GTCGAGACGC TGCGGGACGC CGTTGCGACC
AGCTATCTCC TGCTCACACT CCAGGAGCGG GCTGCCCTGC GACGGCTCGC CACCTTCGGG
AACCGCTGGT CGGTCAAGCT GGCCGAGGAG ATGCTCGGAG TCGGCGCCGA ACCGGCGGGA
ACGCTGCTGG TCGTCGACCC GGTTGCGCTG TTGGACCGAC TCCGGGAGCT GGGCCTACTC
AGCATTCGGG GGGTGGGGCC GTTCCGGTTC CGGCTGCTCG ACGCCGTCCG GGAGTTCGCT
GTCGAGCAGG CTGCCGGCGC GGGTGAGCTC ACCGTGGCCC GGCGTCACCA TGCGCGGGTC
ATGGCCAGGC TGGTCGCCGA GACGGCCCCG TACCTGGTCG GGGCGGACCT GACCGCGGCG
GTGCACCGGC TGGACGACGT GGGCGGGGAC ATCAGCTCCG CACTCGCGCA TGCCGCTGTC
GACGAACCGG TGACCGCCCT GGGCCTGGCG GCCGGGCTCG TCCGGTGGTG GCGCTTTCGG
GGGCGGGACG TCGCCGGCCG GCAGTGGCTG CGCCGGTTGC TGGCGGATCC GCGTACCGCT
GACGTCGCCC CCGTTCAGCG GGCGTGGGCG TTGCTGGGTG TGGCCCGGCT GGCTGCGGAG
CACGGCGCGG GGGCGGAGGA ACTGCCGGCC GCCCGCGCCG CACTCGCCGC CTTGCAGTCG
GCCGGTGACG TTGCGGGTGA GCTGGAGGCC CGTACCGTTC TGGGTAGGTT GTTCACCGGC
ACCGGCGACC ACGATGAGGC GCGGGGGCAG GCCGAGGCGG TACTGGCGCT GGCCACCCGG
CACGGGCGGA TCCGGGACAT GACGGTGGCG CAGAACAACC TGGCCTGGCA TGGGATCCGG
GTCGGTGACC TCGCCACCGC CCGGCGCCGG CTGGCTGCCG CCGATCGACT GGCGGCCCAG
TGCGGGGAGC AGCGGTTACG CGTACTCGCG ATGGCCAATC TCGCCGAGGT CACGCGTCTT
GAGGGCCGGT ACGACGTCGC GGTCGACCAG GGGCGGAGGA CGCTGGCGGC GTTGACTGCG
CTGGGCGACC CGGGGCACCA TCGGCGGGTG CTGGGCACGG TCGGGTTGGC GTTGGCGCTG
GACGATCGCG TGGCGGAGGC GGCGGAGGTG CTGGCCGAGC TGCGACCGGG TGGGCCGGCG
GCGGGTCTGA GCTGGATGCC AGCGGACGGG ATCTGTGGGT TGATCGAAGG CACGTTGGCG
TTGCGCCGGG GCGATCGGGA GCTGGCGGCC GAGTGGTTCG CTGTCGCTGC CGAGGCGGGG
GCCAACGGTC AGGACCGCCG TGACCTGGTG GAGGCGCTGG TGGGGCTGGC CGCCAGCACG
GCGGATCCGT CCGTGTTGGA TCGGCTGGAT GAGATCTGCC GGGTCAGTGG GATCCGCCTG
TTGCCGCCGG AGGTGGAGGC ATTGGCTGCG GTGGCCCGCC GGCCGTGA
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| Protein sequence | MNPDDDHSRW SGGQMGLPDL LRGHRLTAGL TQAELAGRAG IGVRTVRDVE RGRSSRPQRT
TVELLATALG LVGAARSTFV AAARHVPTPR YPESESLLHV GPDGMVRPTT LPPAPELIGR
ERDVAELVGM LTSEVTARLV SLVGLAGVGK TALALSASHA AAGHFPGGVA GVLTGEGTDV
AELLAASAAV FGAARLPELA TRLAGQPALL LVDAVERAPG TVAEAVHQLA TVVPSLRVLV
TGRHPVGLRG ERVRPVAPLD TPSPDRDEAG PVVLARFPAV ALFIARLKLV RPNPPTAAEL
PALARLVRRL GGLPLAIELM AARGRILDLN ELLDRYGDRV LDLATFSGAA ERPGWSAADP
GPTQRTPAAV VETLRDAVAT SYLLLTLQER AALRRLATFG NRWSVKLAEE MLGVGAEPAG
TLLVVDPVAL LDRLRELGLL SIRGVGPFRF RLLDAVREFA VEQAAGAGEL TVARRHHARV
MARLVAETAP YLVGADLTAA VHRLDDVGGD ISSALAHAAV DEPVTALGLA AGLVRWWRFR
GRDVAGRQWL RRLLADPRTA DVAPVQRAWA LLGVARLAAE HGAGAEELPA ARAALAALQS
AGDVAGELEA RTVLGRLFTG TGDHDEARGQ AEAVLALATR HGRIRDMTVA QNNLAWHGIR
VGDLATARRR LAAADRLAAQ CGEQRLRVLA MANLAEVTRL EGRYDVAVDQ GRRTLAALTA
LGDPGHHRRV LGTVGLALAL DDRVAEAAEV LAELRPGGPA AGLSWMPADG ICGLIEGTLA
LRRGDRELAA EWFAVAAEAG ANGQDRRDLV EALVGLAAST ADPSVLDRLD EICRVSGIRL
LPPEVEALAA VARRP
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