Gene Pnuc_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1632 
Symbol 
ID5053142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1698893 
End bp1699555 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID640471805 
Productputative aldolase 
Protein accessionYP_001156410 
Protein GI145589813 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTT CTATTAATAG CAAGTCAGAA GAATCCAAAC ACCGCGAACA AATTGTTGAG 
TTTGGAAAGT CAATTTTTGA TAGAGGGCTT ACGGCTGGCA GTAGCGGTAA TTTGAGTGTG 
CGCTTGGATG ATGGTTGGTT ATTAACCCCA ACTAATGCTT CTTTAGGAAG ATTGGATCCA 
GCCACCCTGA CAAAATTAGA TTGGGATGGC AATACTGTCA GTGGTTTGCC GCCCTCTAAA 
GAAGCGTTTT TACATAGAGC TATGTACAGC ACTAGAGGCG GGGCAAAAGG TATTGTGCAT 
TTGCATTCCA CCTATTCTGC CGCCGTTTCT TGTATGTGTG GCCTCAATCA CGATAGCTGT 
ATTCCTCCGC TTACCCCTTA TTTTGTGATG AAGGTGGGGC GTTTACCATT GGCCCCATAT 
CACCGCCCCG GTGATCCTGA CTTAGCTGCG GTGATTGAAA AGTTAGCGGC GAAGAATTCT 
TCTGTATTGC TAGCCAATCA TGGCCCAGTA GTTTCTGCCA ATTCTCTAGA AGCTGCGGTT 
AATGCAGCTG AAGAGCTCGA AGAAACAGCC AAATTATTTT TACTCCTGAA AGGTGTTGAA 
ACACGCCCGT TAGATGAGGC GCAGATTCAA GATCTTAAGA AAACTTTCAA CCTCGATATT 
TAA
 
Protein sequence
MTFSINSKSE ESKHREQIVE FGKSIFDRGL TAGSSGNLSV RLDDGWLLTP TNASLGRLDP 
ATLTKLDWDG NTVSGLPPSK EAFLHRAMYS TRGGAKGIVH LHSTYSAAVS CMCGLNHDSC 
IPPLTPYFVM KVGRLPLAPY HRPGDPDLAA VIEKLAAKNS SVLLANHGPV VSANSLEAAV 
NAAEELEETA KLFLLLKGVE TRPLDEAQIQ DLKKTFNLDI