Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1094 |
Symbol | |
ID | 5054006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1100933 |
End bp | 1102648 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471264 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001155874 |
Protein GI | 145589277 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACATGTA CTTGGTCGTA TCAAGTATTC GGACAGGTCG ATGCTGGAGC GCTGCAACAG GGTCTTGAGC AGCAATTACC ATTGCCATCC CCTTTGGCTT TGCCTGAGCC TAGTAAAGCT GCGCCAGTTC AGCCTAGCGC TCCCAAACAA GGGGAAGTGC GTTTCACGGT CAAGTCATTT GTACTGGAGG GTGTCAATAT TCTTCCTGAG TCTGAAGTGC AGTTAGCGAT TCGTTCTTGG GTTGGGGTGC CAGTTAGCTT TGATGATCTG CAAAGAGCAT GTGATGCCAT TCAAAATTTA TATCGCAGTA AGGGTTACAC GGTTCAGGCA ATATTGCCAC CACAAAAGAT TGCGGATGGC ATTGTAAAAA TATTAGTTAC CGAAGCAAAG TTGGGAAAAG TGGTCGTAGA AAATCCTAAA GGACCAACTC GCTTCAGTAA AGAACGAGCA GCAAGCTACA TTACTTATGC CAATCCCATT GGTGCTCCAT TGAGCATGCC TGCGATTGAG CGAGCTGTAA CCATCTTGAA TGAAACACCC GGCGTTATCG TTCTGAGCCA ATTAGAACCT GGTGATAAGG ACGGTGAGTC AGATTTACGC CTCCAATTAA CTCAGCCCGA TCTCGTGCAA GGACGTGTTG AAGCCAATAC CTATGGCAGT AGAACAACAG GCGCGAATCA GGGTATTGTC GCCTTAAATC TGAATAACCC CATTGGTATT GGCGAATCTT TTTCTTTAAA TGGAATCGTG TCGCAAGGCT CGCAATATAT TCAGGGGGCG ATTTCCGCAC CAGCCTCACC TGATGGCTTG CGTTTAGGTC TTGCAGGTAC CTTCCTAAAT TATAAGAATG TTAGTAACTA TGCCTATAAC GGTGGTGCAG GCTCGGCCTG GACAACCGGT GTTAGTGGTG CATATCCTTT GATCCGAAGC CCAGGAGCTA ACCTAAATGG ATCTGTTAAC TACGATATCA AGAGCTATAA CAATACAAAT TTCATCACTG ATAGCGTTAT TAGTGCCTAC AACATCAATA ATCTCTCTGC GGGGCTATCC GGAAATCTAG CTGATGACAT TGGGTATGGC GCCATCAATA CTGGTTCTGT AACCATGGTT CTAGGGCACC TCGATATTCA GGCGACTAGC CAATCTGGTT ATGGACTGTA CGCAATTCCG GACACAACTC CCACAGCTTA TGGAGTTGTG ACCCCATCTA ATTTTGCCAA GTTAGCATTC TCGGCTAATC GTACTCAGCA ACTAGATCAA AGTGGTAATA CGAATTTATA TGCCGGTGTG TCTGGTCAAT TTGCATCAGT CAATTTAAAT ACGGCGGAAC AAATTTACCT TGGCGGTCCT TATGGAGTTC GTGCATATCC GGTAGCACAA TCAGGGGGCA CTCAAGGTGG ATTATTCACT GTTGAACTGA GGCATCGTAT TTATGAAAAG TTTACTTTGT CTACCTTCTT TGATGGTGGT GTAGTTCAGC AATATAAAAA TTTATATCCA GGTTGGCAGG GTCAAACTAA TGCCAACAAT ACTTACTCTT TAATGGGGGC TGGTTTTGGT GTGAAGTGGG ATTACGAAGG GTGGGGTATC AATGCGATGG TTGCATGGAA GGTTGGTCAA AACCCACTTT ATAGTTCTAC AGGACAGGCG GTTAATACGG ATGGAACAAC CACTCAACCT AGGGGTTGGG TAAGTGCAAG TTATAACTTT AATTAA
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Protein sequence | MTCTWSYQVF GQVDAGALQQ GLEQQLPLPS PLALPEPSKA APVQPSAPKQ GEVRFTVKSF VLEGVNILPE SEVQLAIRSW VGVPVSFDDL QRACDAIQNL YRSKGYTVQA ILPPQKIADG IVKILVTEAK LGKVVVENPK GPTRFSKERA ASYITYANPI GAPLSMPAIE RAVTILNETP GVIVLSQLEP GDKDGESDLR LQLTQPDLVQ GRVEANTYGS RTTGANQGIV ALNLNNPIGI GESFSLNGIV SQGSQYIQGA ISAPASPDGL RLGLAGTFLN YKNVSNYAYN GGAGSAWTTG VSGAYPLIRS PGANLNGSVN YDIKSYNNTN FITDSVISAY NINNLSAGLS GNLADDIGYG AINTGSVTMV LGHLDIQATS QSGYGLYAIP DTTPTAYGVV TPSNFAKLAF SANRTQQLDQ SGNTNLYAGV SGQFASVNLN TAEQIYLGGP YGVRAYPVAQ SGGTQGGLFT VELRHRIYEK FTLSTFFDGG VVQQYKNLYP GWQGQTNANN TYSLMGAGFG VKWDYEGWGI NAMVAWKVGQ NPLYSSTGQA VNTDGTTTQP RGWVSASYNF N
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